The SUSTAIN EU-ASEAN project aiming at establishing a more sustainable and integrated research and innovation cooperation between the EU and the ASEAN region in the areas of climate action, resource efficiency and raw materials has now published its first project newsletter.

This first issue of the SUSTAIN EU-ASEAN Newsletter contains information about the outcomes from the first project Networking and Cluster Session that took place on 23 January 2014 in Bangkok, Thailand, as well as features a news item about the forthcoming sessions scheduled for 28 Match 2014 in Brussels, Belgium. More can be found in the Newsletter available here.

The SUSTAIN EU-ASEAN coordinating action will focus on climate action, resource efficiency and raw materials issues and will aim to enhance collaboration between researchers in the EU and the ASEAN region. Addressing these issues in a coherent way is vital for sustainable development that leads to economic prosperity, social cohesion and environmental integrity. Both regions have developed innovative ideas to reduce greenhouse gas emissions, to adapt to climate change, improve resource efficiency and manage raw materials.

Issue 72 of the CBD Technical Series is now out focusing on "EARTH OBSERVATION FOR BIODIVERSITY MONITORING : A review of current approaches and future opportunities for tracking progress towards the Aichi Biodiversity Targets". The issue shows how earth observation technologies can and should fit into systems for biodiversity monitoring, as well as demonstrates how these approaches could further improve relevant indicators for the Aichi Biodiversity Targets. It illustrates a clear track from observations done by remote sensing platforms through Essential Biodiversity Variables to biodiversity indicators and ultimately to the assessment of progress towards the Aichi Biodiversity Targets and ultimately in support of evidence-based decision making. EU BON is also featured in this report.

The goal of the CBD Technical Series is to contribute to the dissemination of up-to-date and accurate information on selected topics that are important for the conservation of biological diversity, the sustainable use of its components and the equitable sharing of its benefits. A large and growing body of evidence has clearly established the need to disseminate synthesis publications relevant to CBD objectives and selected reports presented at CBD meetings.

The CBD Technical Series is intended to:

• Foster scientific and technical cooperation;
• Improve communication between the Convention and the scientific community;
• Increase awareness of current biodiversity-related problems and concerns; and
• Facilitate widespread and effective use of the growing body of scientific and technical information on conserving and using biological diversity.

The full report is available here.

Researchers and the public can now have immediate access to data underlying discovery of new species of life on Earth, under a new streamlined system linking taxonomic research with open data publication.

The partnership paves the way for unlocking and preserving a wealth of 'small data' backing up research conclusions, which often become lost within a few years of an article's publication in an academic journal.

In the first example of the new collaboration in action, the Biodiversity Data Journal carries a peer-reviewed description of a new species of spider discovered during a field course in Borneo just one month ago. At the same time, the data showing location of the spider's occurrence in nature are automatically harvested by the Global Biodiversity Information Facility (GBIF), and richer data such as images and the species description are exported to the Encyclopedia of Life (EOL).

This contrasts with an average 'shelf life' of twenty-one years between field discovery of a new species and its formal description and naming, according to a recent study in Current Biology.

A group of scientists and students discovered the new species of spider during a field course in Borneo, supervised by Jeremy Miller and Menno Schilthuizen from the Naturalis Biodiversity Center, based in Leiden, the Netherlands. The species was described and submitted online from the field to the Biodiversity Data Journal through a satellite internet connection, along with the underlying data . The manuscript was peer-reviewed and published within two weeks of submission. On the day of publication, GBIF and EOL have harvested and included the data in their respective platforms.

The new workflow established between GBIF, EOL and Pensoft Publishers' Biodiversity Data Journal, with the support of the Swiss NGO Plazi, automatically exports treatment and occurrence data into a Darwin Core Archive, a standard format used by GBIF and other networks to share data from many different sources. This means GBIF can extract these data on the day of the article's publication, making them immediately available to science and the public through its portal and web services, further enriching the biodiversity data already freely accessible through the GBIF network. Similarly, the information and multimedia resources become accessible via EOL's species pages.

One of the main purposes of the partnership is to ensure that such data remain accessible for future use in research. A recent study published in Current Biology found that 80 % of scientific data are lost in less than 10 years following their creation.

Donald Hobern, GBIF's Executive Secretary, commented: "A great volume of extremely important information about the world's species is effectively inaccessible, scattered across thousands of small datasets carefully curated by taxonomic researchers. I find it very exciting that this new workflow will help preserve these 'small data' and make them immediately available for re-use through our networks."

"Re-use of data published on paper or in PDF format is a huge challenge in all branches of science", said Prof. Lyubomir Penev, managing director of Pensoft and founder of the Biodiversity Data Journal. "This problem has been tackled firstly by our partners from Plazi who created a workflow to extract data from legacy literature and submit it to GBIF. The workflow currently launched by GBIF, EOL and the Biodiversity Data Journal radically shortens the way from publication of data to their sharing and re-use and makes the whole process cost efficient", added Prof. Penev.

The elaboration of the workflow from BDJ and Plazi to GBIF through Darwin Core Archive was supported by the EU-funded project EU BON (Building the European Biodiversity Observation Network, grant No 308454). The basic concept has been initially discussed and outlined in the course of the pro-iBiosphere project (Coordination and policy development in preparation for a European Open Biodiversity Knowledge Management System, addressing Acquisition, Curation, Synthesis, Interoperability and Dissemination, grant No 312848).

Original source:

Miller J, Schilthuizen M, Burmester J, van der Graaf L, Merckx V, Jocqué M, Kessler P, Fayle T, Breeschoten T, Broeren R, Bouman R, Chua W, Feijen F, Fermont T, Groen K, Groen M, Kil N, de Laat H, Moerland M, Moncoquet C, Panjang E, Philip A, Roca-Eriksen R, Rooduijn B, van Santen M, Swakman V, Evans M, Evans L, Love K, Joscelyne S, Tober A, Wilson H, Ambu L, Goossens B (2014) Dispatch from the field: ecology of micro web-building spiders with description of a new species. Biodiversity Data Journal 2: e1076. DOI: 10.3897/BDJ.2.e1076

Hoffmann A, Penner J, Vohland K, Cramer W, Doubleday R, Henle K, Kõljalg U, Kühn I, Kunin WE, Negro JJ, Penev L, Rodríguez C, Saarenmaa H, Schmeller DS, Stoev P, Sutherland WJ, Tuama1 EO, Wetzel F, Häuser CL (2014) Improved access to integrated biodiversity data for science, practice, and policy - the European Biodiversity Observation Network (EU BON). Nature Conservation 6: 49–65. doi: 10.3897/natureconservation.6.6498

The European Space Agency (ESA) is Europe’s gateway to space. Its mission is to shape the development of Europe’s space capability and ensure that investment in space continues to deliver benefits to the citizens of Europe and the world.  ESA is an international organisation with 20 Member States.

How is EU BON connected to space research? As a speaker at the EU BON General Meeting, which took place on Crete between 30 March - 3 April 2014, Marc Paganini of the European Space Agency explains the collaboration between ESA and GEO BON, and how EU BON is involved.

In the following interview he continues the topic:

Marc Paganini (left) and Dirk Schmeller (right) at the EU BON General Meeting 2014

1) For most of the general public space and biodiversity research hardly have anything to do with each other, can you explain how the European Space Agency (ESA) and the idea of remote sensing communities make these two meet?

It is widely recognized that in-situ observations available on biological diversity are very scarce for most of the Earth’s ecosystems and are often insufficient for determining precisely the global status and trends of biodiversity worldwide. In most cases, satellite Earth Observations do not provide a direct measurement of biodiversity but, if properly used with ground collection of biodiversity data and species and habitat modeling, remote sensing can become an important and essential component of biodiversity monitoring systems. There are multiple cases where remote sensing is often the only instrument that can offer large scale monitoring, as for example in highly variable ecosystems such as wetlands or in remote areas that can hardly be monitored by field campaigns.

The recent and future evolution of the portfolio of EO satellites offers huge potential for increasing the use of EO products into biodiversity monitoring systems. The lack of data continuity has always been a barrier for the biodiversity community to invest in EO technology.  A commitment from Space Agencies to provide sustained observations on the long term is a strong incentive for the biodiversity community to invest in Space. The Sentinel series of the European Copernicus program, together with the freely available data from other space agencies such as the Landsat family of the US Geological Survey, will bring unprecedented long-term continuity of observations for the biodiversity community. In that context, free and open data policy to taxpayer-funded satellite remote sensing imagery is becoming a "de facto" standard amongst Space Agencies and a unique opportunity for the biodiversity community to use widely EO products to monitor biodiversity trends.

2) How is the ESA involved with the aims of EU BON, where do the two initiatives intersect?

ESA and many other Space Agencies are becoming more and more committed in helping the biodiversity community at large, in improving their capacity to use remote sensing data for monitoring biodiversity trends.

First there is a coordinated action from all Space Agencies through the Committee on Earth Observation Satellites (CEOS) and its involvement in the Group of Earth Observation (GEO). The GEO is a voluntary partnership of governments and international organizations who engaged jointly in developing a comprehensive, coordinated and sustained system of observations of the Earth with the ultimate objective to enhance scientifically-sound decision making. Biodiversity is one of the primary societal benefit areas of GEO and is addressed by the GEO Biodiversity Observation Network (GEO BON). CEOS is actively involved in GEO BON, principally through the participation to its steering committee of the European, US and German Space Agencies, namely ESA, NASA and DLR. Since EU BON is the principal European contribution to GEO BON, and has, amongst its objectives, the aim to integrate biodiversity data from ground observations to remote sensing information, ESA is directly concerned by the EU BON development in using remote sensing for terrestrial, freshwater and marine realms.

Second, ESA has its own EO application development programs, and funds a wide range of Research & Development projects for biodiversity and ecosystem services. In that context, ESA has established close relationships with the European Environment Agency (EEA) but also with the secretariats and scientific bodies of major Multilateral Environmental Agreements (MEA) such as the Convention on Biological Diversity (CBD) and the Ramsar Convention on wetlands. The findings of the ESA-funded EO projects on biodiversity and ecosystem services are highly relevant to EU BON. It is therefore expected that the ESA and EU BON activities in relation to the use of RS for biodiversity monitoring will offer some convergence of evidence showcases for the whole biodiversity community.

3) How do you see the future of collaboration with EU BON?

The high potential for satellite Earth Observations to support biodiversity monitoring is growing but is yet to be fully realised. The recent efforts of GEO BON, supported by the GEO Plenary and the CBD Conference of the Parties, to define a set of minimum essential observational requirements to monitor biodiversity trends will give considerable impetus for space agencies and for the remote sensing community to focus their work on a small set of well defined EO products that will serve the needs of the biodiversity community at large. In that context ESA is firmly engaged in supporting the development of these emerging Essential Biodiversity Variables (EBVs). EU BON together with ESA can be pioneers in the early development and demonstration.

The "Building the European Biodiversity Observation Network" EU BON General Meeting took place between 30 March - 3 April 2014 in Heraklion on Crete, to present major project results and set objectives for the future. The meeting was preceeded by a review paper recently published in the open access journal Nature Conservation, to point out EU BON researchh interests and objectives for the future of biodiversity protection.

This is a group photo of the participants in the recent EU BON General Meeting in Crete, Greece.

The 2014 General Meeting brought together keynote speakers Jörg Freyhof (GEO BON, Executive Director), Marc Paganini (European Space Agency), Jerry Harrison (UNEP-WCMC) with the entire EU BON consortium to discuss collaborations between the project and other important initiatives in the areas of earth observation, particularly in remote sensing and in situ approaches to biodiversity data collection, as well as in the use and analysis of biodiversity data for forecasting and scenario building, and environmental policy.

"The high potential for satellite Earth Observations to support biodiversity monitoring is growing but is yet to be fully realised. The recent efforts of GEO BON, supported by the GEO Plenary and the CBD Conference of the Parties, to define a set of minimum essential observational requirements to monitor biodiversity trends will give considerable impetus for space agencies and for the remote sensing community to focus their work on a small set of well defined earth observations products that will serve the needs of the biodiversity community at large. In that context ESA is firmly engaged in supporting the development of these emerging Essential Biodiversity Variables (EBVs). EU BON together with ESA can be pioneers in the early development and demonstration." comments Marc Paganini, European Space Agency, on the future collaboration between the two initiatives.

The world's biodiversity is in an ongoing dramatic decline that despite conservation efforts remains unprecedented in its speed and predicted effects on global ecosystem functioning and services. The lack of available integrated biodiversity information for decisions in sectors other than nature conservation has been recognized as a main obstacle and the need to provide readily accessible data to support political decisions has been integrated into the CBD's "Strategic Plan for Biodiversity 2011–2020" and the Aichi targets. The recently published EU BON review paper points out how the project will use its potential to improve the interaction between citizens, science and policy for a better future of biodiversity protection.

EU BON aims to enable decision makers at various levels to make use of integrated and relevant biodiversity information adapted to their specific requirements and scales. Disparate and unconnected databases and online information sources will be integrated to allow improved monitoring and evaluation of biodiversity and measures planned or taken at different spatial and temporal scales. This requires strong efforts not only with regard to technical harmonization between databases, models, and visualization tools, but also to improve the dialogue between scientific, political, and social networks, spanning across several scientific disciplines as well as a variety of civil science organizations and stakeholder groups.

The project is focusing mainly on the European continent but contributes at the same time to the globally oriented Group on Earth Observations Biodiversity Observation Network (GEO BON), which itself contributes to the Group of Earth Observation System of Systems (GEOSS). EU BON will build on existing information infrastructures such as GBIF, LifeWatch and national biodiversity data centres in Europe, and will integrate relevant biodiversity data from on-ground observations to remote sensing information, covering terrestrial, freshwater and marine habitats.

Original Source:

Hoffmann A, Penner J, Vohland K, Cramer W, Doubleday R, Henle K, Kõljalg U, Kühn I, Kunin WE, Negro JJ, Penev L, Rodríguez C, Saarenmaa H, Schmeller DS, Stoev P, Sutherland WJ, Ó Tuama É, Wetzel FT, Häuser CL (2014) Improved access to integrated biodiversity data for science, practice, and policy - the European Biodiversity Observation Network (EU BON). Nature Conservation 6: 49–65. doi: 10.3897/natureconservation.6.6498

The April 2014 mirror updates of FishBase (www.fishbase.ca and www.fishbase.us); are now available online.

FishBase stats to date: ( 32800 Species, 303100 Common names, 53900 Pictures,
50200 References, 2110 Collaborators, 700000 Visits/Month )

The Heinz-Nixdorf-Chair for Distributed Information Systems at the Friedrich Schiller University of Jena (Germany) invites applications for a fully funded PhD student position in Biodiversity Data Visualization for the data management project of the Biodiversity Exploratories (BE) Priority Program.

Deadline for application: 2nd, May 2014

Start date: June 2014 or later

What this is about

The data management project provides the platform for data storage and information exchange for the projects of the DFG Priority Program "Biodiversity Exploratories". Examples of the thematic focus of the projects include botany, forestry, soil, animal, fluxes, modeling, and remote sensing. This diversity is reflected in the format, structure, and semantics of their data which we manage.

Tasks in this project will be centered on the investigation and development of novel visualization methods and user-friendly tools for exploration, search and discovery, quality assurance and integration of the heterogeneous, large volume biodiversity data.  Overall, the study should contribute to the science of visualization for big-data-driven biodiversity research.

More information on the requirements, conditions and how to apply find in the official job offer attached below.

A new updated version of Euro+Med Plantbase was made available online in the middle of April 2014. For the first time, the economically important gymnosperms (coniferous trees), and the genus Thalictrum, as the first part of the large Ranunculaceae family, are treated in Euro+Med Plantbase.

Euro+Med Plantbase integrates and critically evaluates information from Flora Europaea, Med-Checklist, the Flora of Macaronesia, and from regional and national floras and checklists from the area as well as additional taxonomic and floristic literature. This is complemented by the European taxa of several families taken from the World Checklist of Selected Plant Families and of the Leguminosae from the International Legume Database and Information Service ILDIS. By April 2014 it provides access to 187 plant families, corresponding to ca. 92 % of the European flora of vascular plants.

The Euro+Med Plantbase web portal is accessible at http://ww2.bgbm.org/EuroPlusMed/.

Web services for Euro+Med merged with Fauna Europaea, ERMS, and Index Fungorum are provided by VLIZ at http://www.eu-nomen.eu/portal/webservices.php. The services will be also registered for use in EU BON in summer 2014.

Philosophical Transactions of the Royal Society B (2014) doi: 10.1098/rstb.2013.0190

Assessing and predicting ecosystem responses to global environmental change and its impacts on human well-being are high priority targets for the scientific community. The potential for synergies between remote sensing science and ecology, especially satellite remote sensing and conservation biology, has been highlighted by many in the past. Yet, the two research communities have only recently begun to coordinate their agendas. Such synchronization is the key to improving the potential for satellite data effectively to support future environmental management decision-making processes. With this themed issue, we aim to illustrate how integrating remote sensing into ecological research promotes a better understanding of the mechanisms shaping current changes in biodiversity patterns and improves conservation efforts. Added benefits include fostering innovation, generating new research directions in both disciplines and the development of new satellite remote sensing products.

The GEOSS Architecture Implementation Pilot (AIP) develops and deploys new process and infrastructure components for the GEOSS Common Infrastructure (GCI) and the broader GEOSS architecture.

To present the GCI an "Introduction to the GEOSS Common Infrastructure (GCI)" virtual workshop will be held today 21 May 2013 at 14:00 UTC.

Virtual meeting details: https://www4.gotomeeting.com/join/628333311

Europe's brown bear, wolf, wolverine, lynx – at least one of these species can now be found in 21 EU Member States. After a lengthy period of decline their numbers are growing once more, but coexistence with man can be problematic. In an effort to solve the social and economic problems that sometimes result from this new expansion, the European Commission has launched a platform where farmers, conservationists, hunters, landowners and scientists can exchange ideas and best practices on sharing the same land with large carnivores.

The EU Platform on Coexistence between People and Large Carnivores will support constructive dialogue between key stakeholder organisations at the European level. Launching the platform, EU Environment Commissioner Janez Potočnik said: "We need to treat our natural neighbours with respect – but we also need to heed the concerns of those whose lives are genuinely affected by their close proximity. My warm congratulations to the organisations that have worked together to set up this important platform, which represents a major step forward in efforts to address the issue of peaceful coexistence."

The European Union is home to five species of large carnivores. All suffered dramatic declines in numbers and distribution as a consequence of human activity, but increasing protection and public awareness about their vital role in healthy ecosystems have caused many populations to stabilize or increase, and to return to areas from which they had been absent for decades or even centuries.

While this recovery is seen by some as a great conservation success, it has not been without its opponents. The issue involves a diversity of stakeholders such as hunters, foresters, livestock producers, reindeer herders, landowners, rural communities, conservation organizations and the wider public. These groups are influenced by and perceive large carnivores in different ways, and in some cases these differences can be a source of conflict. The platform will facilitate exchanges of knowledge and promote ways and means to minimize, and wherever possible, find equitable solutions to these conflicts.

The platform launched today follows a number of efforts to understand the conflicts between stakeholders over large carnivores, the results of which were set out in workshops conclusions and in a report.

Next steps

The Platform will hold its first working session immediately following the official launch today, on 10 June. It will adopt terms of reference and a work plan. The Platform will hold one annual meeting and organize additional workshops on selected topics. It will be supported by a web-based resource centre that will serve as the main tool to disseminate information on the activities of the platform, identify good practices in the form of documents or a manual, act as a gateway to the portals of the member organisations, and host media resources such as press kits for journalists.

For more information:

Original press release: http://europa.eu/rapid/press-release_IP-14-648_en.htm

Visit the large carnivore website of DG Environment at http://ec.europa.eu/environment/nature/conservation/species/carnivores/index_en.htm

http://ec.europa.eu/environment/nature/index_en.htm

The signing ceremony and moderated panel discussion is streamed (https://new.livestream.com/corlive1/events/2977474/embed) on the internet (also see http://ec.europa.eu/environment/nature/conservation/species/carnivores/index_en.htm)

Temperature is a main driver for most ecological processes, and temperature time series provide key environmental indicators for various applications and research fields. High spatial and temporal resolutions are crucial for detailed analyses in various fields of research. A disadvantage of temperature data obtained by satellites is the occurrence of gaps that must be reconstructed. Here, we present a new method to reconstruct high-resolution land surface temperature (LST) time series at the continental scale gaining 250-m spatial resolution and four daily values per pixel. Our method constitutes a unique new combination of weighted temporal averaging with statistical modeling and spatial interpolation. This newly developed reconstruction method has been applied to greater Europe, resulting in complete daily coverage for eleven years. To our knowledge, this new reconstructed LST time series exceeds the level of detail of comparable reconstructed LST datasets by several orders of magnitude. Studies on emerging diseases, parasite risk assessment and temperature anomalies can now be performed on the continental scale, maintaining high spatial and temporal detail. We illustrate a series of applications in this paper. Our dataset is available online for download as time aggregated derivatives for direct usage in GIS-based applications (Reconstructed MODIS Land Surface Temperature Dataset - http://gis.cri.fmach.it/eurolst/).

Source: Metz M, Rocchini D, Neteler M. (2014) Surface Temperatures at the Continental Scale: Tracking Changes with Remote Sensing at Unprecedented Detail.Remote Sensing 6(5): 3822-3840. doi: 10.3390/rs6053822

Target group: programmers, developers and system engineers. The workshop is open to anybody who might be interested to learn more about the DINA-system.

Preliminary agenda:

• Presentations from all DINA-partners
• APIs, service oriented architecture and road map for distributed development, guidelines and principles on how to build a module and join the DINA-system
• Case studies
• Delivery options: creating installations from hosted environment, virtual machines down to code.

A detailed program will be available by the end of August 2014.

There will be a SETF-meeting for DINA consortium members on the 15th of September.

Welcome to register for the workshop here:

DINA - Technical Workshop 16-18 September, Stockholm

The workshop is an activity within WP 1 Task 1.4

Four papers on species traits have been recently published in ZooKeys, Ecology and Ecology, Evolution and the Biodiversity Data Journal respectivelly covering data on the butterflies in Europe, birds and mammals of the world, the terrestrial mammals of the world and marine polychaetes.

Schweiger O, Harpke A, Wiemers M, Settele J (2014) CLIMBER: Climatic niche characteristics of the butterflies in Europe. ZooKeys 367: 65–84. doi: 10.3897/zookeys.367.6185 Resource ID: GBIF key: http://www.gbif.org/dataset/e2bcea8c-dfea-475e-a4ae-af282b4ea1c5

Hamish Wilman, Jonathan Belmaker, Jennifer Simpson, Carolina de la Rosa, Marcelo M. Rivadeneira, and Walter Jetz. 2014. EltonTraits 1.0: Species-level foraging attributes of the world's birds and mammals. Ecology 95:2027. http://dx.doi.org/10.1890/13-1917.1

Kissling, W. D., Dalby, L., Fløjgaard, C., Lenoir, J., Sandel, B., Sandom, C., Trøjelsgaard, K. and Svenning, J.-C. (2014), Establishing macroecological trait datasets: digitalization, extrapolation, and validation of diet preferences in terrestrial mammals worldwide. Ecology and Evolution. doi: 10.1002/ece3.1136

Faulwetter S, Markantonatou V, Pavloudi C, Papageorgiou N, Keklikoglou K, Chatzinikolaou E, Pafilis E, Chatzigeorgiou G, Vasileiadou K, Dailianis T, Fanini L, Koulouri P, Arvanitidis C (2014) Polytraits: A database on biological traits of marine polychaetes. Biodiversity Data Journal 2: e1024. DOI: 10.3897/BDJ.2.e1024

To read more about the courses and to register, visit the official DEST webpage: http://www.taxonomytraining.eu/content/modern-taxonomy-course-programme-2013-2014

Funded by the "Severo Ochoa" Excellence Program awarded by the Spanish Ministry of Economy and Competitiveness, the Doñana Biological Station (www.ebd.csic.es) seeks a Postdoctoral fellow for two-years with the aim to conduct research in the field of Biological Invasions. 

EBD-CSIC is interested to examine the multifaceted causes and consequences of biological invasions, a key component of global change. The ultimate goal is to improve our knowledge of the factors that influence the success and impacts of invasions by plants and vertebrates. For this purpose, we investigate species traits conferring invasive potential, the vulnerability of ecosystems to be invaded, and the sensitivity of native biodiversity to invasions under different environmental conditions and scenarios of global change.

Deadline for interested applicants: 17th June-17th July, 2014

Please see attached file for more details (download, pdf)

The  8th GEO European Projects Workshop (GEPW-8) took place in Athens, Greece, on 12 and 13 June, hosted by the Greek GEO Office - National Observatory of Athens and co-organized by the Mariolopoulos-Kanaginis Foundation for the Environmental Sciences.

The event was intended to bring all those interested in and actively contributing to the Global Earth Observations System of Systems (GEOSS) from all over Europe together, in order to present their work and discuss how Europe can contribute to this international effort, especially in the wake of the launch of the new EU Framework Programme for Research, Horizon 2020, and renewal of the mandate of GEO for another 10 years through the endorsement of the 2014 Geneva Declaration.

Oral presentations, a book of abstracts and the photos from the event are now uploaded and available for download on the events website.

EU BON is happy to announce that Memoranda of Understanding have been signed with four new associated partners. The EU BON family is now joined by DataOne (Observation Network for Earth), USA; Fondation pour la Recherche sur la Biodiversité (FRB) / ECOSCOPE, France; Atlas Florae Europaeae (AFE), Finland; and the Natural Environment Centre / SYKE (Finnish Environment Institute), Finland. Welcome to all!

DataOne (Observation Network for Earth)

Natural Environment Centre / SYKE (Finnish Environment Institute)

The Finnish Environment Institute (SYKE) promotes the conservation of biodiversity by various measures, e.g. by assessments of the conservation status of species and natural habitats or by research on methods of management and restoration of habitats. An important field of research is the significance of ecosystem services and their interactions with biodiversity. SYKE's tasks also include finding solutions to problems with invasive species, assessment of the environmental impacts of genetically modified organisms and permits for international trade in endangered species.

The 3rd International Conference on Biodiversity and the UN Millennium Development Goals will take place between October 29-31, 2014 in Aix-en-Provence, France. under the tematic title "Biodiversity and Food Security – From Trade-offs to Synergies".

EU BON is pleased to welcome a new associated partner Long-Term Ecosystem Research (LTER) Europe to its family!

Long-Term Ecosystem Research (LTER) is an essential component of world-wide efforts to better understand ecosystems. This comprises their structure, functions, and long-term response to environmental, societal and economic drivers. LTER contributes to the knowledge base informing policy and to the development of management options in response to the Grand Challenges under Global Change.

From the beginning (around 2003) the design of LTER-Europe has focussed on the integration of natural sciences and ecosystem research approaches, including the human dimension. LTER-Europe was heavily involved in conceptualizing socio-ecological research (LTSER). As well as LTER Sites, LTER-Europe features LTSER Platforms, acting as test infrastructures for a new generation of ecosystem research across European environmental and socio-economic gradients.

ECOSCOPE (Network of Biodiversity Research Observatories) associates the SINP (Information System on Nature and Landscapes) to a shared event that will focus on the complementarity between "research - expertise" on biodiversity through the emerging concept of "Essential Biodiversity Variables" (EBVs).

The seminar, scheduled for Monday, November 3, 2014 in Paris, is open to scientists, observatories’ managers and their teams, and to all who are involved in the study of the state and dynamics of biodiversity for research and expertise.

The aims of this seminar are to increase awareness and understanding of EBVs, their interest for observatories (visibility, synergies) to benefit to observatories’ scientific managers and data users. It is also to define how this concept can be implemented at national scale, in connection with international initiatives. 

Programme will be available in available in September, for registration: follow the link !

The Creative-B project final even will take place on 26 Sep 2014 in Brussels. During this event, a roadmap of global data infrastructures supporting biodiversity and ecosystem research will be presented.

In the last two decades quite a number of activities emerged to manage, share and deploy the fast growing data volumes from observations, collections, sensors and other data sources in biodiversity and ecosystem research. This data "gravity" pushed new applications and services, resulting in the development and establishment of large-scale research infrastructures. Following an initiative of the European LifeWatch research infrastructure, a number of large-scale data research infrastructures* with a global outreach in this scientific area teamed together in the project Creative-B (Coordination of Research e-Infrastructures Activities Toward an International Virtual Environment for Biodiversity)**.

The collaboration resulted in drafting a global Roadmap focusing on common priorities and infrastructure engagement, enhancing infrastructure interoperability, and the legal and governance implications. Specific issues are addressing challenges to sustain data availability and services, user interaction and value delivery, cooperation for infrastructure interoperability as well as legal interoperability, and finally education and training. This Roadmap shows how global interaction is promoting complementary development while fostering synergy for supporting frontier research and addressing global and societal challenges. The event in Brussels will also highlight some implications for other stakeholders such as funding and governmental bodies.

Registration is now open here: http://creative-b-2014.sciencesconf.org/registration

Find out more on the event website, and in the event program.

The third issue of the EU BON newsletter is now out.

This issue contains information about our new associated partners, alongside news from the project, interviews and articles from international and project meetings, as well as announcements for future events of interest.

To download the newsletter, please click on the image below.

It is also available for download in the project’s Media Center alongside the previous 2 issues.

The classical treatise "Flora of Northumberland and Durham" by Nathaniel John Winch is re-published through the innovative Advanced Books platform as an example of combining modern information technology together with historical scholarship to create a new sort of resource and data re-use. This publication will be supporting ongoing research on the botany of the region, which can be seen as a model for other regions in Europe.

The on-line semantically enriched re-publication marries the meticulous detail of old books with the interconnectedness of the internet bringing advantages of the digitization and markup efforts such as data extraction and collation, distribution and re-use of content, archiving of different data elements in relevant repositories and so on.

"Historic biodiversity literature is not just of cultural interest, it can be used to chart biogeographic change and help us understand the impacts of environmental change on biodiversity. Even if we are trying to predict future scenarios for biodiversity, understanding the changes of the past will help understand the changes we should expect in the future" said Dr Quentin Groom from the Meise Botanical Garden, Belgium, who initiated the project and marked up the original text.

The North-east of England has seen many changes since the publication of Winch's Flora. In the 19th Century the area was a powerhouse of the industrial revolution. It was an important coal mining area and significant for the production of iron and steel. It was also a centre for industries such as shipbuilding and engineering. In contrast the uplands in the west of the region were some of the most isolated areas in England, covered in blanket bog and rarely visited.

Since that time heavy industry and mining have declined, but the population has continued to grow. Agriculture and forestry have become mechanized changing the countryside perhaps beyond the recognition of Winch. Many of the plants and localities he mentions have disappeared and a large number of new species have been introduced. The local botanists are still very active in the region. With GPS systems and modern maps they are mapping the region's flora in ever more detail.

The extensive efforts of Quentin Groom from the Botanic Garden Meise and editor of this re-publication combined with the cutting-edge technologies for semantic enhancements used by Pensoft's Advanced Books platform, have resulted in additional details including links to the original citations and coordinates of the mentioned localities. In some cases the habitat that Winch described for a locality differs dramatically from what can be found in the same location nowadays.

The flora, for example, frequently mentions Prestwick Carr, an area of lowland bog, once full of rare species. Sadly it was largely drained just thirty years after the publication of the flora. Yet in recent years the Northumberland Wildlife Trust has been working to restore the bog to its former glory. "When reading Winch's flora, it is easy to see what has been lost, but more importantly what remains to be conserved", comments Groom.

The re-publication of Winch's flora is just one step towards fully understanding all the impacts on wild plants of all the environmental changes that have occurred since the 19th century. Nevertheless, digitization of this flora not only tells us about plants but also about the history of science. Between the lines of this flora one can see a rudimentary understanding of ecology and the beginnings of research on phytogeography.

Consider that in 1831 Charles Darwin set sail on the Beagle, collecting and cataloguing biodiversity around the world, much as Winch had done in North-east England over the preceding 30 years. Field botany at the time was not just a hobby, but a serious pursuit that led to many new discoveries.

Understanding the causes of biodiversity change is only possible if you have data over a long period. The North-east England has an enviable botanical history dating back to William Turner (1508-1568), the so-called, Father of English Botany, who came from Morpeth in Northumberland. Yet he was only the first in a long list of North-eastern botanists, including John Wallis (1714-1793), Nathaniel John Winch (1769-1838), John Gilbert Baker (1834-1920), George Ralph Tate (1805-1871), Gordon Graham and George Swan (1917). Their publications and the works of many others have contributed to a large corpus of literature on the region's flora.

Fauna Europaea started in 2000 as an EC-FP5 four-year project, delivering its first release in 2004. After 14 years of steady progress and successful participations in several EC projects, as a part of the EC-FP7 European Biodiversity Observation Network project (EU BON), to increase the general awareness of the work done by the contributors and to extend the general dissemination of the Fauna Europaea results, the Biodiversity Data Journal has applied its novel e-Publishing tools to prepare data papers for all 56 major taxonomic groups.

Fauna Europaea provides a public web-service with an index of scientific names (including important synonyms) of all living European land and freshwater animals, their geographical distribution at country level, and some additional information. The Fauna Europaea project covers about 230,000 taxonomic names, including 130,000 species name. This represents a huge effort by more than 400 contributing specialists throughout Europe and is a unique (standard) reference suitable for many users in science, government, industry, nature conservation and education.

'Contributions on Fauna Europaea' is the second series launched by the Biodiversity Data Journal after the Checklist of British and Irish Hymenoptera and the first one that embraces thematic data-papers structured in a common pattern extracted from a large database. This novel publication model will assemble in a single-issue 56 data-papers on different taxonomic groups covered by the Fauna Europaea project in the period 2000-2014 and a range of accompanying papers highlighting various aspects of this project (gap-analysis, software design, taxonomic assessments, etc.).

This is the first collection of data-papers of this scale. It will formalise and effectively publish the results of nearly 500 contributors building the largest European animal (taxonomic) database. The new publication model provides a reliable mechanism for citation and bibliographic indexing of large and uniformly structured databases.

"The publication of Fauna Europaea data papers brings a number of benefits for science, for example it stimulates experts to hand-over descriptive details on their groups, triggers new ways of community networking and participation, motivates experts to update their data, supports a better documentation of their achievements, including issues like 'micro-publications', and increase an ownership feeling with the associated effort" said Dr Yde de Jong, coordinator of the Fauna Europaea and Pan-European Species directories Infrastructure (PESI) projects.

The launch of this large collection of data papers coincides with one more cutting-edge innovation of the Biodiversity Data Journal, the publication of an API, a first of its kind, to import complex and data-rich manuscripts, which include text, data, images, in-text citations, references, in fact anything that a manuscript may contain.

"I am happy that these exciting innovations coincided with the first birthday of the Biodiversity Data Journal. Just a year ago we launched this new concept with the motto: Making your data count! These novel approaches and tools are an excellent example how our concept evolved!" comments Prof. Lyubomir Penev, Managing Director of Pensoft Publishers.

Original Sources:

de Jong Y, Verbeek M, Michelsen V, Bjørn P, Los W, Steeman F, Bailly N, Basire C, Chylarecki P, Stloukal E, Hagedorn G, Wetzel F, Glöckler F, Kroupa A, Korb G, Hoffmann A, Häuser C, Kohlbecker A, Müller A, Güntsch A, Stoev P, Penev L (2014) Fauna Europaea – all European animal species on the web. Biodiversity Data Journal 2: e4034. doi: 10.3897/BDJ.2.e4034

Gibson D, Bray R, Hunt D, Georgiev B, Scholz T, Harris P, Bakke T, Pojmanska T, Niewiadomska K, Kostadinova A, Tkach V, Bain O, Durette-Desset M, Gibbons L, Moravec F, Petter A, Dimitrova Z, Buchmann K, Valtonen E, de Jong Y (2014) Fauna Europaea: Helminths (Animal Parasitic). Biodiversity Data Journal 2: e1060. doi: 10.3897/BDJ.2.e1060

Context:

The Earth's rapidly changing environment is putting critical ecosystem services at risk. There are many challenges involved in understanding global environmental changes, and in providing societies with the policy-relevant knowledge base to deal with them. These challenges will reach across many aspects of scientific endeavour. Indeed, the research community requires state-of-the-art research infrastructures (RIs) to have the capability to explain and predict global environmental changes. In this context the Experimentation in Ecosystem Research conference will provide a platform for discussions on cutting-edge technological tools, large-scale integrative experimental design, technical constraints, data access and last but not least ecosystem modelling. The conference will attract speakers and delegates from around the world and will offer opportunities to reinforce global cooperation.  

Main topics:

• Grand challenges: With the current set of Experimental Research infrastructures in ecosystem science, do we have the capacity to tackle the grand challenges of today and tomorrow?
• In vitro and in natura : How realistic are they, and how they can be better linked?
• Technologies: Which emerging technologies could enhance (or are needed for) the performance and services offered by our RIs?
• Data: Towards an e-infrastructure for ecosystem research - challenges and opportunities
• Modelling:  How accurate is our capacity to forecast and upscale, and what is missing? How can we communicate uncertainty? How do we strike the right balance between modelling and experiments?

The conference is organized under the framework of the European FP7 project ExpeER ( www.expeeronline.eu )

Find out more in the flyer attached below or on the event's website: https://colloque6.inra.fr/expeer-conference

A memorandum of understanding has been signed between EU BON and Norwegian Institute for Nature Research (NINA). The hand over took place at the 21st GBIF Governing Board (GB21) in New Delhi (India) on 16-18 September 2014 between EU BON project co-ordinator Christoph Häuser and Roald Vang (Head of Department on Information technology) and Frank Hanssen from NINA.

IMAGE: At the handover: EU BON co-ordinator Christoph Häuser and Roald Vang (Head of Department on Information technology) and Frank Hanssen from NINA.

The Norwegian Institute for Nature Research (NINA) is Norway’s leading institution for applied ecological research, with broad-based expertise on the genetic, population, species, ecosystem and landscape level, in terrestrial, freshwater and coastal marine environments. The core activities encompass strategic ecological research integrated with long-term monitoring, as well as a variety of environmental assessments and development of methodologies. Most work is aimed at improving the understanding of biodiversity, ecosystem services, ecological processes and their main drivers to facilitate better management of ecosystem services and resources. NINA addresses a wide variety of interdisciplinary issues involving both ecologists and social scientists, and plays an important role in European and other international research cooperation.

Five  projects focused on citizen science began their life in autumn 2012 as a part of the topic ENV.2012.6.5-1 "Developing community based environmental monitoring and information systems using innovative and novel earth observation applications". Their goals include developing novel technologies and applications in the domain of Earth Observation; exploiting portable devices (smartphones, tablets, etc.) and enabling effective participation by citizens in environmental stewardship based on broad stakeholder and user involvement in support of both community and policy priorities.

These projects are:

OmniScientis - combining the active participation of the stakeholders, especially citizens, with the implementation of innovative technologies to improve the governance of odour nuisance. OMNISCIENTIS implements an odour monitoring and information system allowing feedback in real-time, based on a web-based Service Platform.

Citclops - developing an observatory based on citizens’ science applications for the bio-optical monitoring of coast and ocean. Specifically, the Citclops action develops systems to retrieve and use data on the colour, transparency and fluorescence of seawater using low-cost sensors and smart phones along with contextual information.

COBWEB - seeking to design, develop and validate the necessary software infrastructure to facilitate and make possible the opportunistic harvesting and quality control of crowdsourced environmental data.

Full article available at: http://dx.doi.org/10.1186/1471-2105-12-S15-S1 

The 4th Global Biodiversity Outlook (GBO 4) was officially launched on 6 Oct 2014, during the opening day of the Twelfth Meeting of the Conference of the Parties to the Convention on Biological Diversity (COP 12) in Pyeongchang, Korea. Global Biodiversity Outlook (GBO) is the flagship publication of the Convention on Biological Diversity. It is a periodic report that summarizes the latest data on the status and trends of biodiversity and draws conclusions relevant to the further implementation of the Convention.

GBO 4 is a comprehensive report that serves as a mid-term analysis towards the 20 "Aichi Biodiversity Targets". The report states significant progress towards meeting some components of the majority of the Aichi  Biodiversity Targets. Some target components, such as conserving at least 17 per cent of terrestrial and  inland water areas, are on track to be met. However, in most cases this progress is seen as not sufficient to achieve the targets set for 2020, and additional action is required to keep the Strategic Plan for Biodiversity 2011–2020 on course. 

The full report can be accessed here: http://www.cbd.int/gbo4/

The latest instalment of the Aichi Targets Passport is available now to download as an app from iTunes and Google Play.

As the flagship publication of the Biodiversity Indicators Partnership (BIP), the Aichi Targets Passport provides annual updates on the global biodiversity indicators that monitor progress towards the Strategic Plan for Biodiversity 2011-2020 and the underlying Aichi Biodiversity Targets.

The suite of indicators presented in the Aichi Targets Passport was brought together by the BIP. They are as far as possible, global in their coverage, scientifically valid and peer reviewed, and relevant to the Aichi Biodiversity Targets. In particular, indicators are presented to highlight the progress that has been made towards each target so far and what baselines exist from which future progress can be monitored.

The Aichi Targets Passport was first released as a "proof of concept" in October 2012 and included one or two indicators for each Aichi Biodiversity Target. Since the release of the Beta version, the BIP Partnership has continued working to enhance and increase the number of global indicators available for each of the targets. In its app format, the information contained in the Aichi Targets Passport is at your fingertips at any time.

This latest edition of the Aichi Targets Passport has been released in tandem with the fourth edition of the Convention on Biological Diversity’s Global Biodiversity Outlook (GBO-4). In addition to information on which of the Aichi Biodiversity Targets is on-course to completion and which targets require more action, GBO-4 presents options that could halt further biodiversity loss.

The indicators presented in the Aichi Targets Passport are those contained in CBD decision XI/3 with some additional indicators that have been, or are being, developed to fill gaps.

To download the Aichi Targets Passport visit: http://www.bipindicators.net/resource/aichipassport 

iTunes: http://goo.gl/dOWujN

Google Play: http://goo.gl/BN6AfG

An EU-BON Workshop focusing on the DINA system - "Alpha version of mobilization system – the DINA-system MS141" - was hosted the 16. to 18. September 2014 by the Swedish Museum of Natural History in Stockholm.

Target group: programmers, developers and system engineers, but the workshop was open to anybody who was interested to learn more about the DINA-system.

Content included:

• Presentations from all DINA-partners
• APIs, service oriented architecture and road map for distributed development, guidelines and principles on how to build a module and join the DINA-system
• Case studies
• Delivery options: creating installations from hosted environment, virtual machines down to source code

For program, particpants list, presentations etc please vist the DINA wiki

On Tuesday 30 September 2014, the European Parliament Intergroup on "Climate Change, Biodiversity and Sustainable Development", in collaboration with the European Commission and the International Union for Conservation of Nature (IUCN), organised a full day conference entitled: "Nature-Based Solutions: Innovation potential for Smart, Sustainable and Inclusive Growth in Europe."

Bringing together 140 participants including representatives from the European Institutions, local and regional authorities, research institutes, NGOs and International organisations, as well as private sector representatives, this conference aimed at promoting the solutions that nature can offer in tackling major challenges, such as climate change and natural disasters, in ensuring food security to an increasing population, in protecting the health of European citizens, and the conservation of biodiversity in the EU and at the global level.