id Inhibition of oxidative metabolism by nitric oxide restricts EMCV replication selectively in pancreatic beta-cells [Enzymology] By www.jbc.org Published On :: 2020-12-25T00:06:30-08:00 Environmental factors, such as viral infection, are proposed to play a role in the initiation of autoimmune diabetes. In response to encephalomyocarditis virus (EMCV) infection, resident islet macrophages release the pro-inflammatory cytokine IL-1β, to levels that are sufficient to stimulate inducible nitric oxide synthase (iNOS) expression and production of micromolar levels of the free radical nitric oxide in neighboring β-cells. We have recently shown that nitric oxide inhibits EMCV replication and EMCV-mediated β-cell lysis and that this protection is associated with an inhibition of mitochondrial oxidative metabolism. Here we show that the protective actions of nitric oxide against EMCV infection are selective for β-cells and associated with the metabolic coupling of glycolysis and mitochondrial oxidation that is necessary for insulin secretion. Inhibitors of mitochondrial respiration attenuate EMCV replication in β-cells, and this inhibition is associated with a decrease in ATP levels. In mouse embryonic fibroblasts (MEFs), inhibition of mitochondrial metabolism does not modify EMCV replication or decrease ATP levels. Like most cell types, MEFs have the capacity to uncouple the glycolytic utilization of glucose from mitochondrial respiration, allowing for the maintenance of ATP levels under conditions of impaired mitochondrial respiration. It is only when MEFs are forced to use mitochondrial oxidative metabolism for ATP generation that mitochondrial inhibitors attenuate viral replication. In a β-cell selective manner, these findings indicate that nitric oxide targets the same metabolic pathways necessary for glucose stimulated insulin secretion for protection from viral lysis. Full Article
id What challenges does the new president of Somalia face? By www.chathamhouse.org Published On :: Tue, 28 Jun 2022 12:56:43 +0000 What challenges does the new president of Somalia face? Explainer Video aboudiaf.drupal 28 June 2022 Ahmed Soliman examines the challenges the new president Hassan Sheikh Mohamud faces in his first 100 days as president. Key issues for the new administration are a deteriorating situation with regards to drought as close to half the population are facing food insecurity due to a fourth failed rainy season. Combined with an inflation rate above ten per cent, many Somalis are at risk of famine and starvation. Many areas of the country are affected from the pastoralist regions to those which house IDP camps around the capital city and other towns, all being exacerbated by the war in Ukraine as Somalia was importing much of its wheat imports from Ukraine and Russia. Full Article
id Guidance and best practices for nuclear cardiology laboratories during the coronavirus disease 2019 (COVID-19) pandemic: An Information Statement from ASNC and SNMMI By jnm.snmjournals.org Published On :: 2020-05-15T05:25:22-07:00 Full Article
id Pattern of Failure in Patients with Biochemical Recurrence After PSMA Radioguided Surgery By jnm.snmjournals.org Published On :: 2024-09-26T12:46:37-07:00 Visual Abstract Full Article
id Theranostics for Meningioma on the Rise: New EANM/EANO/RANO/SNMMI Guidelines Pave the Way to Improved Patient Outcomes Using Radiolabeled Somatostatin Receptor Ligands By jnm.snmjournals.org Published On :: 2024-10-10T08:33:38-07:00 Full Article
id SNMMI Procedure Standard/EANM Practice Guideline for Brain [18F]FDG PET Imaging, Version 2.0 By jnm.snmjournals.org Published On :: 2024-10-17T09:03:09-07:00 PREAMBLEThe Society of Nuclear Medicine and Molecular Imaging (SNMMI) is an international scientific and professional organization founded in 1954 to promote the science, technology, and practical application of nuclear medicine. The European Association of Nuclear Medicine (EANM) is a professional nonprofit medical association that facilitates communication worldwide between individuals pursuing clinical and research excellence in nuclear medicine. The EANM was founded in 1985. The EANM was founded in 1985. SNMMI and EANM members are physicians, technologists, and scientists specializing in the research and practice of nuclear medicine.The SNMMI and EANM will periodically define new guidelines for nuclear medicine practice to help advance the science of nuclear medicine and to improve the quality of service to patients throughout the world. Existing practice guidelines will be reviewed for revision or renewal, as appropriate, on their fifth anniversary or sooner, if indicated.Each practice guideline, representing a policy statement by the SNMMI/EANM, has undergone a thorough consensus process in which it has been subjected to extensive review. The SNMMI and EANM recognize that the safe and effective use of diagnostic nuclear medicine imaging requires specific training, skills, and techniques, as described in each document. Reproduction or modification of the published practice guideline by those entities not providing these services is not authorized.These guidelines are an educational tool designed to assist practitioners in providing appropriate care for patients. They are not inflexible rules or requirements of practice and are not intended, nor should they be used, to establish a legal standard of care. For these reasons and those set forth below, both the SNMMI and the EANM caution against the use of these guidelines in litigation in which the clinical decisions of a practitioner are called into question.The ultimate judgment regarding the propriety of any specific procedure or course of action must be made by the physician or medical physicist in light of all the circumstances presented. Thus, there is no implication that an approach differing from the guidelines, standing alone, is below the standard of care. To the contrary, a conscientious practitioner may responsibly adopt a course of action different from that set forth in the guidelines when, in the reasonable judgment of the practitioner, such course of action is indicated by the condition of the patient, limitations of available resources, or advances in knowledge or technology subsequent to publication of the guidelines.The practice of medicine includes both the art and the science of the prevention, diagnosis, alleviation, and treatment of disease. The variety and complexity of human conditions make it impossible to always reach the most appropriate diagnosis or to predict with certainty a particular response to treatment.Therefore, it should be recognized that adherence to these guidelines will not ensure an accurate diagnosis or a successful outcome. All that should be expected is that the practitioner will follow a reasonable course of action based on current knowledge, available resources, and the needs of the patient to deliver effective and safe medical care. The sole purpose of these guidelines is to assist practitioners in achieving this objective. Full Article
id Intraarterial Administration of Peptide Receptor Radionuclide Therapy in Patients with Advanced Meningioma: Initial Safety and Efficacy By jnm.snmjournals.org Published On :: 2024-10-24T11:58:49-07:00 Visual Abstract Full Article
id Pacific Rim timeline: Information for defenders from a braid of interlocking attack campaigns By news.sophos.com Published On :: Thu, 31 Oct 2024 12:31:52 +0000 Sophos X-Ops unveils five-year investigation tracking China-based groups targeting perimeter devices Full Article Security Operations Chinese APT Cyberoam featured Pacific Rim Story Sophos Firewall state-sponsored attackers
id Pacific Rim: Inside the Counter-Offensive—The TTPs Used to Neutralize China-Based Threats By news.sophos.com Published On :: Thu, 31 Oct 2024 12:56:23 +0000 Sophos X-Ops unveils five-year investigation tracking China-based groups targeting perimeter devices Full Article Security Operations Chinese APT Chinese spying featured Pacific Rim Story Sophos Firewall state-sponsored attackers
id Overdose crisis: more common sense and less ideology By www.bmj.com Published On :: Tuesday, November 12, 2024 - 10:55 Full Article
id Citrus Vascular Proteomics Highlights the Role of Peroxidases and Serine Proteases during Huanglongbing Disease Progression By www.mcponline.org Published On :: 2020-12-01 Jessica Y. FrancoDec 1, 2020; 19:1936-1951Research Full Article
id Novel Proteomic Profiling of Epididymal Extracellular Vesicles in the Domestic Cat Reveals Proteins Related to Sequential Sperm Maturation with Differences Observed between Normospermic and Teratospermic Individuals By www.mcponline.org Published On :: 2020-12-01 Tricia RowlisonDec 1, 2020; 19:2090-2103Research Full Article
id Separation and identification of permethylated glycan isomers by reversed phase nanoLC-NSI-MS By www.mcponline.org Published On :: 2020-12-29 Simone KurzDec 29, 2020; 0:RA120.002266v1-mcp.RA120.002266Research Full Article
id High-throughput and site-specific N-glycosylation analysis of human alpha-1-acid glycoprotein offers a great potential for new biomarker discovery By www.mcponline.org Published On :: 2020-12-29 Toma KeserDec 29, 2020; 0:RA120.002433v1-mcp.RA120.002433Research Full Article
id Stoichiometry of Nucleotide Binding to Proteasome AAA+ ATPase Hexamer Established by Native Mass Spectrometry By www.mcponline.org Published On :: 2020-12-01 Yadong YuDec 1, 2020; 19:1997-2014Research Full Article
id Identification of novel serological autoantibodies in Takayasu arteritis patients using HuProt arrays By www.mcponline.org Published On :: 2020-12-17 Xiao-Ting WenDec 17, 2020; 0:RA120.002119v1-mcp.RA120.002119Research Full Article
id Global Proteome and Phosphoproteome Characterization of Sepsis-induced Kidney Injury By www.mcponline.org Published On :: 2020-12-01 Yi-Han LinDec 1, 2020; 19:2030-2046Research Full Article
id Multi-sample mass spectrometry-based approach for discovering injury markers in chronic kidney disease By www.mcponline.org Published On :: 2020-12-20 Ji Eun KimDec 20, 2020; 0:RA120.002159v1-mcp.RA120.002159Research Full Article
id OpenPepXL: An Open-Source Tool for Sensitive Identification of Cross-Linked Peptides in XL-MS By www.mcponline.org Published On :: 2020-12-01 Eugen NetzDec 1, 2020; 19:2157-2167Technological Innovation and Resources Full Article
id Kinome Profiling of Primary Endometrial Tumors Using Multiplexed Inhibitor Beads and Mass Spectrometry Identifies SRPK1 as Candidate Therapeutic Target By www.mcponline.org Published On :: 2020-12-01 Alison M. KurimchakDec 1, 2020; 19:2068-2089Research Full Article
id Proteome-wide Analysis Reveals Substrates of E3 Ligase RNF146 Targeted for Degradation By www.mcponline.org Published On :: 2020-12-01 Litong NieDec 1, 2020; 19:2015-2029Research Full Article
id Identification of Microorganisms by Liquid Chromatography-Mass Spectrometry (LC-MS1) and in Silico Peptide Mass Libraries By www.mcponline.org Published On :: 2020-12-01 Peter LaschDec 1, 2020; 19:2125-2138Technological Innovation and Resources Full Article
id Unraveling the MAX2 Protein Network in Arabidopsis thaliana: Identification of the Protein Phosphatase PAPP5 as a Novel MAX2 Interactor By www.mcponline.org Published On :: 2020-12-28 Sylwia StrukDec 28, 2020; 0:RA119.001766v1-mcp.RA119.001766Research Full Article
id CMMB (Carboxylate Modified Magnetic Bead) -based isopropanol gradient peptide fractionation (CIF) enables rapid and robust off-line peptide mixture fractionation in bottom-up proteomics By www.mcponline.org Published On :: 2020-12-22 Weixian DengDec 22, 2020; 0:RA120.002411v1-mcp.RA120.002411Research Full Article
id Systematic identification of P. falciparum sporozoite membrane protein interactions reveals an essential role for the p24 complex in host infection By www.mcponline.org Published On :: 2020-12-22 Julia KnöckelDec 22, 2020; 0:RA120.002432v1-mcp.RA120.002432Research Full Article
id Thyroglobulin interactome profiling defines altered proteostasis topology associated with thyroid dyshormonogenesis By www.mcponline.org Published On :: 2020-11-18 Madison T WrightNov 18, 2020; 0:RA120.002168v1-mcp.RA120.002168Research Full Article
id Proteomic analyses identify differentially expressed proteins and pathways between low-risk and high-risk subtypes of early-stage lung adenocarcinoma and their prognostic impacts By www.mcponline.org Published On :: 2020-11-30 Juntuo ZhouNov 30, 2020; 0:RA120.002384v1-mcp.RA120.002384Research Full Article
id A proteomic approach to understand the clinical significance of acute myeloid leukemia-derived extracellular vesicles reflecting essential characteristics of leukemia By www.mcponline.org Published On :: 2020-11-30 Ka-Won KangNov 30, 2020; 0:RA120.002169v1-mcp.RA120.002169Research Full Article
id Prediction and validation of mouse meiosis-essential genes based on spermatogenesis proteome dynamics By www.mcponline.org Published On :: 2020-11-30 Kailun FangNov 30, 2020; 0:RA120.002081v1-mcp.RA120.002081Research Full Article
id Peptidomics-driven strategy reveals peptides and predicted proteases associated with oral cancer prognosis By www.mcponline.org Published On :: 2020-11-11 Leandro Xavier NevesNov 11, 2020; 0:RA120.002227v1-mcp.RA120.002227Research Full Article
id Proteomic identification of Coxiella burnetii effector proteins targeted to the host cell mitochondria during infection By www.mcponline.org Published On :: 2020-11-11 Laura F FieldenNov 11, 2020; 0:RA120.002370v1-mcp.RA120.002370Research Full Article
id The peptide vaccine of the future By www.mcponline.org Published On :: 2020-12-07 Annika NeldeDec 7, 2020; 0:R120.002309v1-mcp.R120.002309Review Full Article
id ProAlanase is an Effective Alternative to Trypsin for Proteomics Applications and Disulfide Bond Mapping By www.mcponline.org Published On :: 2020-12-01 Diana SamodovaDec 1, 2020; 19:2139-2156Technological Innovation and Resources Full Article
id Plasma proteomic data can contain personally identifiable, sensitive information and incidental findings By www.mcponline.org Published On :: 2020-12-17 Philipp Emanuel GeyerDec 17, 2020; 0:RA120.002359v1-mcp.RA120.002359Research Full Article
id Secretory galectin-3 induced by glucocorticoid stress triggers stemness exhaustion of hepatic progenitor cells [Signal Transduction] By www.jbc.org Published On :: 2020-12-04T00:06:06-08:00 Adult progenitor cell populations typically exist in a quiescent state within a controlled niche environment. However, various stresses or forms of damage can disrupt this state, which often leads to dysfunction and aging. We built a glucocorticoid (GC)-induced liver damage model of mice, found that GC stress induced liver damage, leading to consequences for progenitor cells expansion. However, the mechanisms by which niche factors cause progenitor cells proliferation are largely unknown. We demonstrate that, within the liver progenitor cells niche, Galectin-3 (Gal-3) is responsible for driving a subset of progenitor cells to break quiescence. We show that GC stress causes aging of the niche, which induces the up-regulation of Gal-3. The increased Gal-3 population increasingly interacts with the progenitor cell marker CD133, which triggers focal adhesion kinase (FAK)/AMP-activated kinase (AMPK) signaling. This results in the loss of quiescence and leads to the eventual stemness exhaustion of progenitor cells. Conversely, blocking Gal-3 with the inhibitor TD139 prevents the loss of stemness and improves liver function. These experiments identify a stress-dependent change in progenitor cell niche that directly influence liver progenitor cell quiescence and function. Full Article
id Iron-mediated degradation of ribosomes under oxidative stress is attenuated by manganese [Cell Biology] By www.jbc.org Published On :: 2020-12-11T00:06:20-08:00 Protein biosynthesis is fundamental to cellular life and requires the efficient functioning of the translational machinery. At the center of this machinery is the ribosome, a ribonucleoprotein complex that depends heavily on Mg2+ for structure. Recent work has indicated that other metal cations can substitute for Mg2+, raising questions about the role different metals may play in the maintenance of the ribosome under oxidative stress conditions. Here, we assess ribosomal integrity following oxidative stress both in vitro and in cells to elucidate details of the interactions between Fe2+ and the ribosome and identify Mn2+ as a factor capable of attenuating oxidant-induced Fe2+-mediated degradation of rRNA. We report that Fe2+ promotes degradation of all rRNA species of the yeast ribosome and that it is bound directly to RNA molecules. Furthermore, we demonstrate that Mn2+ competes with Fe2+ for rRNA-binding sites and that protection of ribosomes from Fe2+-mediated rRNA hydrolysis correlates with the restoration of cell viability. Our data, therefore, suggest a relationship between these two transition metals in controlling ribosome stability under oxidative stress. Full Article
id Interrogation of kinase genetic interactions provides a global view of PAK1-mediated signal transduction pathways [Gene Regulation] By www.jbc.org Published On :: 2020-12-11T00:06:20-08:00 Kinases are critical components of intracellular signaling pathways and have been extensively investigated with regard to their roles in cancer. p21-activated kinase-1 (PAK1) is a serine/threonine kinase that has been previously implicated in numerous biological processes, such as cell migration, cell cycle progression, cell motility, invasion, and angiogenesis, in glioma and other cancers. However, the signaling network linked to PAK1 is not fully defined. We previously reported a large-scale yeast genetic interaction screen using toxicity as a readout to identify candidate PAK1 genetic interactions. En masse transformation of the PAK1 gene into 4,653 homozygous diploid Saccharomyces cerevisiae yeast deletion mutants identified ∼400 candidates that suppressed yeast toxicity. Here we selected 19 candidate PAK1 genetic interactions that had human orthologs and were expressed in glioma for further examination in mammalian cells, brain slice cultures, and orthotopic glioma models. RNAi and pharmacological inhibition of potential PAK1 interactors confirmed that DPP4, KIF11, mTOR, PKM2, SGPP1, TTK, and YWHAE regulate PAK1-induced cell migration and revealed the importance of genes related to the mitotic spindle, proteolysis, autophagy, and metabolism in PAK1-mediated glioma cell migration, drug resistance, and proliferation. AKT1 was further identified as a downstream mediator of the PAK1-TTK genetic interaction. Taken together, these data provide a global view of PAK1-mediated signal transduction pathways and point to potential new drug targets for glioma therapy. Full Article
id AggreCount: an unbiased image analysis tool for identifying and quantifying cellular aggregates in a spatially defined manner [Methods and Resources] By www.jbc.org Published On :: 2020-12-18T00:06:18-08:00 Protein quality control is maintained by a number of integrated cellular pathways that monitor the folding and functionality of the cellular proteome. Defects in these pathways lead to the accumulation of misfolded or faulty proteins that may become insoluble and aggregate over time. Protein aggregates significantly contribute to the development of a number of human diseases such as amyotrophic lateral sclerosis, Huntington's disease, and Alzheimer's disease. In vitro, imaging-based, cellular studies have defined key biomolecular components that recognize and clear aggregates; however, no unifying method is available to quantify cellular aggregates, limiting our ability to reproducibly and accurately quantify these structures. Here we describe an ImageJ macro called AggreCount to identify and measure protein aggregates in cells. AggreCount is designed to be intuitive, easy to use, and customizable for different types of aggregates observed in cells. Minimal experience in coding is required to utilize the script. Based on a user-defined image, AggreCount will report a number of metrics: (i) total number of cellular aggregates, (ii) percentage of cells with aggregates, (iii) aggregates per cell, (iv) area of aggregates, and (v) localization of aggregates (cytosol, perinuclear, or nuclear). A data table of aggregate information on a per cell basis, as well as a summary table, is provided for further data analysis. We demonstrate the versatility of AggreCount by analyzing a number of different cellular aggregates including aggresomes, stress granules, and inclusion bodies caused by huntingtin polyglutamine expansion. Full Article
id GUCY2D mutations in retinal guanylyl cyclase 1 provide biochemical reasons for dominant cone-rod dystrophy but not for stationary night blindness [Cell Biology] By www.jbc.org Published On :: 2020-12-25T00:06:31-08:00 Mutations in the GUCY2D gene coding for the dimeric human retinal membrane guanylyl cyclase (RetGC) isozyme RetGC1 cause various forms of blindness, ranging from rod dysfunction to rod and cone degeneration. We tested how the mutations causing recessive congenital stationary night blindness (CSNB), recessive Leber's congenital amaurosis (LCA1), and dominant cone–rod dystrophy-6 (CORD6) affected RetGC1 activity and regulation by RetGC-activating proteins (GCAPs) and retinal degeneration-3 protein (RD3). CSNB mutations R666W, R761W, and L911F, as well as LCA1 mutations R768W and G982VfsX39, disabled RetGC1 activation by human GCAP1, -2, and -3. The R666W and R761W substitutions compromised binding of GCAP1 with RetGC1 in HEK293 cells. In contrast, G982VfsX39 and L911F RetGC1 retained the ability to bind GCAP1 in cyto but failed to effectively bind RD3. R768W RetGC1 did not bind either GCAP1 or RD3. The co-expression of GUCY2D allelic combinations linked to CSNB did not restore RetGC1 activity in vitro. The CORD6 mutation R838S in the RetGC1 dimerization domain strongly dominated the Ca2+ sensitivity of cyclase regulation by GCAP1 in RetGC1 heterodimer produced by co-expression of WT and the R838S subunits. It required higher Ca2+ concentrations to decelerate GCAP-activated RetGC1 heterodimer—6-fold higher than WT and 2-fold higher than the Ser838-harboring homodimer. The heterodimer was also more resistant than homodimers to inhibition by RD3. The observed biochemical changes can explain the dominant CORD6 blindness and recessive LCA1 blindness, both of which affect rods and cones, but they cannot explain the selective loss of rod function in recessive CSNB. Full Article
id Palmitoylation of acetylated tubulin and association with ceramide-rich platforms is critical for ciliogenesis By www.jlr.org Published On :: 2020-12-30 Priyanka TripathiDec 30, 2020; 0:jlr.RA120001190v1-jlr.RA120001190Research Articles Full Article
id Stimulation of ABCB4/MDR3 ATPase activity requires an intact phosphatidylcholine lipid By www.jlr.org Published On :: 2020-12-01 Martin PrescherDec 1, 2020; 61:1605-1616Research Articles Full Article
id A novel phosphoglycerol serine-glycine lipodipeptide of Porphyromonas gingivalis is a TLR2 ligand By www.jlr.org Published On :: 2020-12-01 Frank C. NicholsDec 1, 2020; 61:1645-1657Research Articles Full Article
id PLRP2 selectively localizes synaptic membrane proteins via acyl-chain remodeling of phospholipids By www.jlr.org Published On :: 2020-12-01 Hideaki KugeDec 1, 2020; 61:1747-1763Research Articles Full Article
id Progression of chronic kidney disease in familial LCAT deficiency: a follow-up of the Italian cohort By www.jlr.org Published On :: 2020-12-01 Chiara PavanelloDec 1, 2020; 61:1784-1788Patient-Oriented and Epidemiological Research Full Article
id Bioavailability and spatial distribution of fatty acids in the rat retina after dietary omega-3 supplementation By www.jlr.org Published On :: 2020-12-01 Elisa VidalDec 1, 2020; 61:1733-1746Research Articles Full Article
id Depletion of essential isoprenoids and ER stress induction following acute liver-specific deletion of HMG-CoA reductase By www.jlr.org Published On :: 2020-12-01 Marco De GiorgiDec 1, 2020; 61:1675-1686Research Articles Full Article
id Gene Networks and Pathways for Plasma Lipid Traits via Multi-tissue Multi-omics Systems Analysis By www.jlr.org Published On :: 2020-12-23 Montgomery BlencoweDec 23, 2020; 0:jlr.RA120000713v1-jlr.RA120000713Research Articles Full Article
id A review of phosphatidate phosphatase assays By www.jlr.org Published On :: 2020-12-01 Prabuddha DeyDec 1, 2020; 61:1556-1564Reviews Full Article
id Human glucocerebrosidase mediates formation of xylosyl-cholesterol by {beta}-xylosidase and transxylosidase reactions. By www.jlr.org Published On :: 2020-12-23 Daphne E.C. BoerDec 23, 2020; 0:jlr.RA120001043v1-jlr.RA120001043Research Articles Full Article
id Spatial profiling of gangliosides in mouse brain by mass spectrometry imaging By www.jlr.org Published On :: 2020-12-01 Douglas A. AndresDec 1, 2020; 61:1537-1537Images in Lipid Research Full Article