chi Orchid biology : recent trends & challenges By dal.novanet.ca Published On :: Fri, 1 May 2020 19:44:43 -0300 Callnumber: OnlineISBN: 9789813294561 (electronic bk.) Full Article
chi Neuroinflammation and schizophrenia By dal.novanet.ca Published On :: Fri, 1 May 2020 19:44:43 -0300 Callnumber: OnlineISBN: 9783030391416 (electronic bk.) Full Article
chi Machine learning in medicine : a complete overview By dal.novanet.ca Published On :: Fri, 1 May 2020 19:44:43 -0300 Author: Cleophas, Ton J. M., authorCallnumber: OnlineISBN: 9783030339708 (electronic bk.) Full Article
chi Machine learning in aquaculture : hunger classification of Lates calcarifer By dal.novanet.ca Published On :: Fri, 1 May 2020 19:44:43 -0300 Author: Mohd Razman, Mohd Azraai, authorCallnumber: OnlineISBN: 9789811522376 (electronic bk.) Full Article
chi Instruments for health surveys in children and adolescents By dal.novanet.ca Published On :: Fri, 1 May 2020 19:44:43 -0300 Callnumber: OnlineISBN: 9783319988573 (electronic bk.) Full Article
chi Information retrieval technology : 15th Asia Information Retrieval Societies Conference, AIRS 2019, Hong Kong, China, November 7-9, 2019, proceedings By dal.novanet.ca Published On :: Fri, 1 May 2020 19:44:43 -0300 Author: Asia Information Retrieval Societies Conference (15th : 2019 : Hong Kong, China)Callnumber: OnlineISBN: 9783030428358 Full Article
chi In china's wake : how the commodity boom transformed development strategies in the global south By dal.novanet.ca Published On :: Fri, 1 May 2020 19:44:43 -0300 Author: Jepson, Nicholas, author.Callnumber: OnlineISBN: 9780231547598 electronic book Full Article
chi Healthcare-associated infections in children : a guide to prevention and management By dal.novanet.ca Published On :: Fri, 1 May 2020 19:44:43 -0300 Callnumber: OnlineISBN: 9783319981222 (electronic bk.) Full Article
chi Endocrine surgery in children By dal.novanet.ca Published On :: Fri, 1 May 2020 19:44:43 -0300 Callnumber: OnlineISBN: 9783662542569 (electronic book) Full Article
chi Ecology, conservation, and restoration of Chilika Lagoon, India By dal.novanet.ca Published On :: Fri, 1 May 2020 19:44:43 -0300 Callnumber: OnlineISBN: 9783030334246 (electronic bk.) Full Article
chi Critical care : architecture and urbanism for a broken planet By dal.novanet.ca Published On :: Fri, 1 May 2020 19:44:43 -0300 Callnumber: OnlineISBN: 9780262352871 (electronic bk.) Full Article
chi Communications and networking : 14th EAI International Conference, ChinaCom 2019, Shanghai, China, November 29 - December 1, 2019, proceedings. By dal.novanet.ca Published On :: Fri, 1 May 2020 19:44:43 -0300 Author: ChinaCom (Conference) (14th : 2019 : Shanghai, China)Callnumber: OnlineISBN: 9783030411176 Full Article
chi Clinical manual of fever in children By dal.novanet.ca Published On :: Fri, 1 May 2020 19:44:43 -0300 Author: El-Radhi, A. Sahib, author.Callnumber: OnlineISBN: 9783319923369 (electronic book) Full Article
chi Children’s Palliative Care: An International Case-Based Manual By dal.novanet.ca Published On :: Fri, 1 May 2020 19:44:43 -0300 Callnumber: OnlineISBN: 9783030273750 978-3-030-27375-0 Full Article
chi Chickpea : crop wild relatives for enhancing genetic gains By dal.novanet.ca Published On :: Fri, 1 May 2020 19:44:43 -0300 Callnumber: OnlineISBN: 9780128183007 (electronic bk.) Full Article
chi Exact lower bounds for the agnostic probably-approximately-correct (PAC) machine learning model By projecteuclid.org Published On :: Fri, 02 Aug 2019 22:04 EDT Aryeh Kontorovich, Iosif Pinelis. Source: The Annals of Statistics, Volume 47, Number 5, 2822--2854.Abstract: We provide an exact nonasymptotic lower bound on the minimax expected excess risk (EER) in the agnostic probably-approximately-correct (PAC) machine learning classification model and identify minimax learning algorithms as certain maximally symmetric and minimally randomized “voting” procedures. Based on this result, an exact asymptotic lower bound on the minimax EER is provided. This bound is of the simple form $c_{infty}/sqrt{ u}$ as $ u oinfty$, where $c_{infty}=0.16997dots$ is a universal constant, $ u=m/d$, $m$ is the size of the training sample and $d$ is the Vapnik–Chervonenkis dimension of the hypothesis class. It is shown that the differences between these asymptotic and nonasymptotic bounds, as well as the differences between these two bounds and the maximum EER of any learning algorithms that minimize the empirical risk, are asymptotically negligible, and all these differences are due to ties in the mentioned “voting” procedures. A few easy to compute nonasymptotic lower bounds on the minimax EER are also obtained, which are shown to be close to the exact asymptotic lower bound $c_{infty}/sqrt{ u}$ even for rather small values of the ratio $ u=m/d$. As an application of these results, we substantially improve existing lower bounds on the tail probability of the excess risk. Among the tools used are Bayes estimation and apparently new identities and inequalities for binomial distributions. Full Article
chi Convergence complexity analysis of Albert and Chib’s algorithm for Bayesian probit regression By projecteuclid.org Published On :: Tue, 21 May 2019 04:00 EDT Qian Qin, James P. Hobert. Source: The Annals of Statistics, Volume 47, Number 4, 2320--2347.Abstract: The use of MCMC algorithms in high dimensional Bayesian problems has become routine. This has spurred so-called convergence complexity analysis, the goal of which is to ascertain how the convergence rate of a Monte Carlo Markov chain scales with sample size, $n$, and/or number of covariates, $p$. This article provides a thorough convergence complexity analysis of Albert and Chib’s [ J. Amer. Statist. Assoc. 88 (1993) 669–679] data augmentation algorithm for the Bayesian probit regression model. The main tools used in this analysis are drift and minorization conditions. The usual pitfalls associated with this type of analysis are avoided by utilizing centered drift functions, which are minimized in high posterior probability regions, and by using a new technique to suppress high-dimensionality in the construction of minorization conditions. The main result is that the geometric convergence rate of the underlying Markov chain is bounded below 1 both as $n ightarrowinfty$ (with $p$ fixed), and as $p ightarrowinfty$ (with $n$ fixed). Furthermore, the first computable bounds on the total variation distance to stationarity are byproducts of the asymptotic analysis. Full Article
chi A hierarchical dependent Dirichlet process prior for modelling bird migration patterns in the UK By projecteuclid.org Published On :: Wed, 15 Apr 2020 22:05 EDT Alex Diana, Eleni Matechou, Jim Griffin, Alison Johnston. Source: The Annals of Applied Statistics, Volume 14, Number 1, 473--493.Abstract: Environmental changes in recent years have been linked to phenological shifts which in turn are linked to the survival of species. The work in this paper is motivated by capture-recapture data on blackcaps collected by the British Trust for Ornithology as part of the Constant Effort Sites monitoring scheme. Blackcaps overwinter abroad and migrate to the UK annually for breeding purposes. We propose a novel Bayesian nonparametric approach for expressing the bivariate density of individual arrival and departure times at different sites across a number of years as a mixture model. The new model combines the ideas of the hierarchical and the dependent Dirichlet process, allowing the estimation of site-specific weights and year-specific mixture locations, which are modelled as functions of environmental covariates using a multivariate extension of the Gaussian process. The proposed modelling framework is extremely general and can be used in any context where multivariate density estimation is performed jointly across different groups and in the presence of a continuous covariate. Full Article
chi A hierarchical Bayesian model for predicting ecological interactions using scaled evolutionary relationships By projecteuclid.org Published On :: Wed, 15 Apr 2020 22:05 EDT Mohamad Elmasri, Maxwell J. Farrell, T. Jonathan Davies, David A. Stephens. Source: The Annals of Applied Statistics, Volume 14, Number 1, 221--240.Abstract: Identifying undocumented or potential future interactions among species is a challenge facing modern ecologists. Recent link prediction methods rely on trait data; however, large species interaction databases are typically sparse and covariates are limited to only a fraction of species. On the other hand, evolutionary relationships, encoded as phylogenetic trees, can act as proxies for underlying traits and historical patterns of parasite sharing among hosts. We show that, using a network-based conditional model, phylogenetic information provides strong predictive power in a recently published global database of host-parasite interactions. By scaling the phylogeny using an evolutionary model, our method allows for biological interpretation often missing from latent variable models. To further improve on the phylogeny-only model, we combine a hierarchical Bayesian latent score framework for bipartite graphs that accounts for the number of interactions per species with host dependence informed by phylogeny. Combining the two information sources yields significant improvement in predictive accuracy over each of the submodels alone. As many interaction networks are constructed from presence-only data, we extend the model by integrating a correction mechanism for missing interactions which proves valuable in reducing uncertainty in unobserved interactions. Full Article
chi Modifying the Chi-square and the CMH test for population genetic inference: Adapting to overdispersion By projecteuclid.org Published On :: Wed, 15 Apr 2020 22:05 EDT Kerstin Spitzer, Marta Pelizzola, Andreas Futschik. Source: The Annals of Applied Statistics, Volume 14, Number 1, 202--220.Abstract: Evolve and resequence studies provide a popular approach to simulate evolution in the lab and explore its genetic basis. In this context, Pearson’s chi-square test, Fisher’s exact test as well as the Cochran–Mantel–Haenszel test are commonly used to infer genomic positions affected by selection from temporal changes in allele frequency. However, the null model associated with these tests does not match the null hypothesis of actual interest. Indeed, due to genetic drift and possibly other additional noise components such as pool sequencing, the null variance in the data can be substantially larger than accounted for by these common test statistics. This leads to $p$-values that are systematically too small and, therefore, a huge number of false positive results. Even, if the ranking rather than the actual $p$-values is of interest, a naive application of the mentioned tests will give misleading results, as the amount of overdispersion varies from locus to locus. We therefore propose adjusted statistics that take the overdispersion into account while keeping the formulas simple. This is particularly useful in genome-wide applications, where millions of SNPs can be handled with little computational effort. We then apply the adapted test statistics to real data from Drosophila and investigate how information from intermediate generations can be included when available. We also discuss further applications such as genome-wide association studies based on pool sequencing data and tests for local adaptation. Full Article
chi Hierarchical infinite factor models for improving the prediction of surgical complications for geriatric patients By projecteuclid.org Published On :: Wed, 27 Nov 2019 22:01 EST Elizabeth Lorenzi, Ricardo Henao, Katherine Heller. Source: The Annals of Applied Statistics, Volume 13, Number 4, 2637--2661.Abstract: Nearly a third of all surgeries performed in the United States occur for patients over the age of 65; these older adults experience a higher rate of postoperative morbidity and mortality. To improve the care for these patients, we aim to identify and characterize high risk geriatric patients to send to a specialized perioperative clinic while leveraging the overall surgical population to improve learning. To this end, we develop a hierarchical infinite latent factor model (HIFM) to appropriately account for the covariance structure across subpopulations in data. We propose a novel Hierarchical Dirichlet Process shrinkage prior on the loadings matrix that flexibly captures the underlying structure of our data while sharing information across subpopulations to improve inference and prediction. The stick-breaking construction of the prior assumes an infinite number of factors and allows for each subpopulation to utilize different subsets of the factor space and select the number of factors needed to best explain the variation. We develop the model into a latent factor regression method that excels at prediction and inference of regression coefficients. Simulations validate this strong performance compared to baseline methods. We apply this work to the problem of predicting surgical complications using electronic health record data for geriatric patients and all surgical patients at Duke University Health System (DUHS). The motivating application demonstrates the improved predictive performance when using HIFM in both area under the ROC curve and area under the PR Curve while providing interpretable coefficients that may lead to actionable interventions. Full Article
chi Bayesian indicator variable selection to incorporate hierarchical overlapping group structure in multi-omics applications By projecteuclid.org Published On :: Wed, 27 Nov 2019 22:01 EST Li Zhu, Zhiguang Huo, Tianzhou Ma, Steffi Oesterreich, George C. Tseng. Source: The Annals of Applied Statistics, Volume 13, Number 4, 2611--2636.Abstract: Variable selection is a pervasive problem in modern high-dimensional data analysis where the number of features often exceeds the sample size (a.k.a. small-n-large-p problem). Incorporation of group structure knowledge to improve variable selection has been widely studied. Here, we consider prior knowledge of a hierarchical overlapping group structure to improve variable selection in regression setting. In genomics applications, for instance, a biological pathway contains tens to hundreds of genes and a gene can be mapped to multiple experimentally measured features (such as its mRNA expression, copy number variation and methylation levels of possibly multiple sites). In addition to the hierarchical structure, the groups at the same level may overlap (e.g., two pathways can share common genes). Incorporating such hierarchical overlapping groups in traditional penalized regression setting remains a difficult optimization problem. Alternatively, we propose a Bayesian indicator model that can elegantly serve the purpose. We evaluate the model in simulations and two breast cancer examples, and demonstrate its superior performance over existing models. The result not only enhances prediction accuracy but also improves variable selection and model interpretation that lead to deeper biological insight of the disease. Full Article
chi A hierarchical curve-based approach to the analysis of manifold data By projecteuclid.org Published On :: Wed, 27 Nov 2019 22:01 EST Liberty Vittert, Adrian W. Bowman, Stanislav Katina. Source: The Annals of Applied Statistics, Volume 13, Number 4, 2539--2563.Abstract: One of the data structures generated by medical imaging technology is high resolution point clouds representing anatomical surfaces. Stereophotogrammetry and laser scanning are two widely available sources of this kind of data. A standardised surface representation is required to provide a meaningful correspondence across different images as a basis for statistical analysis. Point locations with anatomical definitions, referred to as landmarks, have been the traditional approach. Landmarks can also be taken as the starting point for more general surface representations, often using templates which are warped on to an observed surface by matching landmark positions and subsequent local adjustment of the surface. The aim of the present paper is to provide a new approach which places anatomical curves at the heart of the surface representation and its analysis. Curves provide intermediate structures which capture the principal features of the manifold (surface) of interest through its ridges and valleys. As landmarks are often available these are used as anchoring points, but surface curvature information is the principal guide in estimating the curve locations. The surface patches between these curves are relatively flat and can be represented in a standardised manner by appropriate surface transects to give a complete surface model. This new approach does not require the use of a template, reference sample or any external information to guide the method and, when compared with a surface based approach, the estimation of curves is shown to have improved performance. In addition, examples involving applications to mussel shells and human faces show that the analysis of curve information can deliver more targeted and effective insight than the use of full surface information. Full Article
chi Fitting a deeply nested hierarchical model to a large book review dataset using a moment-based estimator By projecteuclid.org Published On :: Wed, 27 Nov 2019 22:01 EST Ningshan Zhang, Kyle Schmaus, Patrick O. Perry. Source: The Annals of Applied Statistics, Volume 13, Number 4, 2260--2288.Abstract: We consider a particular instance of a common problem in recommender systems, using a database of book reviews to inform user-targeted recommendations. In our dataset, books are categorized into genres and subgenres. To exploit this nested taxonomy, we use a hierarchical model that enables information pooling across across similar items at many levels within the genre hierarchy. The main challenge in deploying this model is computational. The data sizes are large and fitting the model at scale using off-the-shelf maximum likelihood procedures is prohibitive. To get around this computational bottleneck, we extend a moment-based fitting procedure proposed for fitting single-level hierarchical models to the general case of arbitrarily deep hierarchies. This extension is an order of magnitude faster than standard maximum likelihood procedures. The fitting method can be deployed beyond recommender systems to general contexts with deeply nested hierarchical generalized linear mixed models. Full Article
chi Statistical inference for partially observed branching processes with application to cell lineage tracking of in vivo hematopoiesis By projecteuclid.org Published On :: Wed, 27 Nov 2019 22:01 EST Jason Xu, Samson Koelle, Peter Guttorp, Chuanfeng Wu, Cynthia Dunbar, Janis L. Abkowitz, Vladimir N. Minin. Source: The Annals of Applied Statistics, Volume 13, Number 4, 2091--2119.Abstract: Single-cell lineage tracking strategies enabled by recent experimental technologies have produced significant insights into cell fate decisions, but lack the quantitative framework necessary for rigorous statistical analysis of mechanistic models describing cell division and differentiation. In this paper, we develop such a framework with corresponding moment-based parameter estimation techniques for continuous-time, multi-type branching processes. Such processes provide a probabilistic model of how cells divide and differentiate, and we apply our method to study hematopoiesis , the mechanism of blood cell production. We derive closed-form expressions for higher moments in a general class of such models. These analytical results allow us to efficiently estimate parameters of much richer statistical models of hematopoiesis than those used in previous statistical studies. To our knowledge, the method provides the first rate inference procedure for fitting such models to time series data generated from cellular barcoding experiments. After validating the methodology in simulation studies, we apply our estimator to hematopoietic lineage tracking data from rhesus macaques. Our analysis provides a more complete understanding of cell fate decisions during hematopoiesis in nonhuman primates, which may be more relevant to human biology and clinical strategies than previous findings from murine studies. For example, in addition to previously estimated hematopoietic stem cell self-renewal rate, we are able to estimate fate decision probabilities and to compare structurally distinct models of hematopoiesis using cross validation. These estimates of fate decision probabilities and our model selection results should help biologists compare competing hypotheses about how progenitor cells differentiate. The methodology is transferrable to a large class of stochastic compartmental and multi-type branching models, commonly used in studies of cancer progression, epidemiology and many other fields. Full Article
chi A hierarchical Bayesian model for single-cell clustering using RNA-sequencing data By projecteuclid.org Published On :: Wed, 16 Oct 2019 22:03 EDT Yiyi Liu, Joshua L. Warren, Hongyu Zhao. Source: The Annals of Applied Statistics, Volume 13, Number 3, 1733--1752.Abstract: Understanding the heterogeneity of cells is an important biological question. The development of single-cell RNA-sequencing (scRNA-seq) technology provides high resolution data for such inquiry. A key challenge in scRNA-seq analysis is the high variability of measured RNA expression levels and frequent dropouts (missing values) due to limited input RNA compared to bulk RNA-seq measurement. Existing clustering methods do not perform well for these noisy and zero-inflated scRNA-seq data. In this manuscript we propose a Bayesian hierarchical model, called BasClu, to appropriately characterize important features of scRNA-seq data in order to more accurately cluster cells. We demonstrate the effectiveness of our method with extensive simulation studies and applications to three real scRNA-seq datasets. Full Article
chi Sequential decision model for inference and prediction on nonuniform hypergraphs with application to knot matching from computational forestry By projecteuclid.org Published On :: Wed, 16 Oct 2019 22:03 EDT Seong-Hwan Jun, Samuel W. K. Wong, James V. Zidek, Alexandre Bouchard-Côté. Source: The Annals of Applied Statistics, Volume 13, Number 3, 1678--1707.Abstract: In this paper, we consider the knot-matching problem arising in computational forestry. The knot-matching problem is an important problem that needs to be solved to advance the state of the art in automatic strength prediction of lumber. We show that this problem can be formulated as a quadripartite matching problem and develop a sequential decision model that admits efficient parameter estimation along with a sequential Monte Carlo sampler on graph matching that can be utilized for rapid sampling of graph matching. We demonstrate the effectiveness of our methods on 30 manually annotated boards and present findings from various simulation studies to provide further evidence supporting the efficacy of our methods. Full Article
chi RCRnorm: An integrated system of random-coefficient hierarchical regression models for normalizing NanoString nCounter data By projecteuclid.org Published On :: Wed, 16 Oct 2019 22:03 EDT Gaoxiang Jia, Xinlei Wang, Qiwei Li, Wei Lu, Ximing Tang, Ignacio Wistuba, Yang Xie. Source: The Annals of Applied Statistics, Volume 13, Number 3, 1617--1647.Abstract: Formalin-fixed paraffin-embedded (FFPE) samples have great potential for biomarker discovery, retrospective studies and diagnosis or prognosis of diseases. Their application, however, is hindered by the unsatisfactory performance of traditional gene expression profiling techniques on damaged RNAs. NanoString nCounter platform is well suited for profiling of FFPE samples and measures gene expression with high sensitivity which may greatly facilitate realization of scientific and clinical values of FFPE samples. However, methodological development for normalization, a critical step when analyzing this type of data, is far behind. Existing methods designed for the platform use information from different types of internal controls separately and rely on an overly-simplified assumption that expression of housekeeping genes is constant across samples for global scaling. Thus, these methods are not optimized for the nCounter system, not mentioning that they were not developed for FFPE samples. We construct an integrated system of random-coefficient hierarchical regression models to capture main patterns and characteristics observed from NanoString data of FFPE samples and develop a Bayesian approach to estimate parameters and normalize gene expression across samples. Our method, labeled RCRnorm, incorporates information from all aspects of the experimental design and simultaneously removes biases from various sources. It eliminates the unrealistic assumption on housekeeping genes and offers great interpretability. Furthermore, it is applicable to freshly frozen or like samples that can be generally viewed as a reduced case of FFPE samples. Simulation and applications showed the superior performance of RCRnorm. Full Article
chi Spatio-temporal short-term wind forecast: A calibrated regime-switching method By projecteuclid.org Published On :: Wed, 16 Oct 2019 22:03 EDT Ahmed Aziz Ezzat, Mikyoung Jun, Yu Ding. Source: The Annals of Applied Statistics, Volume 13, Number 3, 1484--1510.Abstract: Accurate short-term forecasts are indispensable for the integration of wind energy in power grids. On a wind farm, local wind conditions exhibit sizeable variations at a fine temporal resolution. Existing statistical models may capture the in-sample variations in wind behavior, but are often shortsighted to those occurring in the near future, that is, in the forecast horizon. The calibrated regime-switching method proposed in this paper introduces an action of regime dependent calibration on the predictand (here the wind speed variable), which helps correct the bias resulting from out-of-sample variations in wind behavior. This is achieved by modeling the calibration as a function of two elements: the wind regime at the time of the forecast (and the calibration is therefore regime dependent), and the runlength, which is the time elapsed since the last observed regime change. In addition to regime-switching dynamics, the proposed model also accounts for other features of wind fields: spatio-temporal dependencies, transport effect of wind and nonstationarity. Using one year of turbine-specific wind data, we show that the calibrated regime-switching method can offer a wide margin of improvement over existing forecasting methods in terms of both wind speed and power. Full Article
chi A hidden Markov model approach to characterizing the photo-switching behavior of fluorophores By projecteuclid.org Published On :: Wed, 16 Oct 2019 22:03 EDT Lekha Patel, Nils Gustafsson, Yu Lin, Raimund Ober, Ricardo Henriques, Edward Cohen. Source: The Annals of Applied Statistics, Volume 13, Number 3, 1397--1429.Abstract: Fluorescing molecules (fluorophores) that stochastically switch between photon-emitting and dark states underpin some of the most celebrated advancements in super-resolution microscopy. While this stochastic behavior has been heavily exploited, full characterization of the underlying models can potentially drive forward further imaging methodologies. Under the assumption that fluorophores move between fluorescing and dark states as continuous time Markov processes, the goal is to use a sequence of images to select a model and estimate the transition rates. We use a hidden Markov model to relate the observed discrete time signal to the hidden continuous time process. With imaging involving several repeat exposures of the fluorophore, we show the observed signal depends on both the current and past states of the hidden process, producing emission probabilities that depend on the transition rate parameters to be estimated. To tackle this unusual coupling of the transition and emission probabilities, we conceive transmission (transition-emission) matrices that capture all dependencies of the model. We provide a scheme of computing these matrices and adapt the forward-backward algorithm to compute a likelihood which is readily optimized to provide rate estimates. When confronted with several model proposals, combining this procedure with the Bayesian Information Criterion provides accurate model selection. Full Article
chi Matching strings in encoded sequences By projecteuclid.org Published On :: Mon, 27 Apr 2020 04:02 EDT Adriana Coutinho, Rodrigo Lambert, Jérôme Rousseau. Source: Bernoulli, Volume 26, Number 3, 2021--2050.Abstract: We investigate the length of the longest common substring for encoded sequences and its asymptotic behaviour. The main result is a strong law of large numbers for a re-scaled version of this quantity, which presents an explicit relation with the Rényi entropy of the source. We apply this result to the zero-inflated contamination model and the stochastic scrabble. In the case of dynamical systems, this problem is equivalent to the shortest distance between two observed orbits and its limiting relationship with the correlation dimension of the pushforward measure. An extension to the shortest distance between orbits for random dynamical systems is also provided. Full Article
chi On stability of traveling wave solutions for integro-differential equations related to branching Markov processes By projecteuclid.org Published On :: Fri, 31 Jan 2020 04:06 EST Pasha Tkachov. Source: Bernoulli, Volume 26, Number 2, 1354--1380.Abstract: The aim of this paper is to prove stability of traveling waves for integro-differential equations connected with branching Markov processes. In other words, the limiting law of the left-most particle of a (time-continuous) branching Markov process with a Lévy non-branching part is demonstrated. The key idea is to approximate the branching Markov process by a branching random walk and apply the result of Aïdékon [ Ann. Probab. 41 (2013) 1362–1426] on the limiting law of the latter one. Full Article
chi Box 3: Children's book illustrations by various artists, Peg Maltby and Dorothy Wall, , ca. 1932-1975 By feedproxy.google.com Published On :: 8/05/2015 2:13:13 PM Full Article
chi Box 4: Children's book illustrations by various artists, Dorothy Wall, ca. 1932 By feedproxy.google.com Published On :: 8/05/2015 2:26:30 PM Full Article
chi Box 6: Children's book illustrations by various artists, Dorothy Wall and Noela Young, ca. 1932-1964 By feedproxy.google.com Published On :: 8/05/2015 2:37:07 PM Full Article
chi Smart research for HSC students: Better searching with online resources By feedproxy.google.com Published On :: Mon, 04 May 2020 01:20:48 +0000 In this online session, we simplify searching for you so that the skills you need in one resource will work wherever you are. Full Article
chi 3 NY children die from syndrome possibly linked to COVID-19 By news.yahoo.com Published On :: Sat, 09 May 2020 09:55:24 -0400 Three children have now died in New York state from a possible complication from the coronavirus involving swollen blood vessels and heart problems, Gov. Andrew Cuomo said Saturday. At least 73 children in New York have been diagnosed with symptoms similar to Kawasaki disease — a rare inflammatory condition in children — and toxic shock syndrome. Full Article
chi U.S. chief justice puts hold on disclosure of Russia investigation materials By news.yahoo.com Published On :: Fri, 08 May 2020 11:50:21 -0400 U.S. Chief Justice John Roberts on Friday put a temporary hold on the disclosure to a Democratic-led House of Representatives committee of grand jury material redacted from former Special Counsel Robert Mueller's report on Russian interference in the 2016 election. The U.S. Court of Appeals for the District of Columbia Circuit ruled in March that the materials had to be disclosed to the House Judiciary Committee and refused to put that decision on hold. The appeals court said the materials had to be handed over by May 11 if the Supreme Court did not intervene. Full Article
chi Chaffetz: I don't understand why Adam Schiff continues to have a security clearance By news.yahoo.com Published On :: Fri, 08 May 2020 14:43:30 -0400 Fox News contributor Jason Chaffetz and Andy McCarthy react to House Intelligence transcripts on Russia probe. Full Article
chi Coronavirus: Chinese official admits health system weaknesses By news.yahoo.com Published On :: Sat, 09 May 2020 11:02:40 -0400 China says it will improve public health systems after criticism of its early response to the virus. Full Article
chi High-Dimensional Posterior Consistency for Hierarchical Non-Local Priors in Regression By projecteuclid.org Published On :: Mon, 13 Jan 2020 04:00 EST Xuan Cao, Kshitij Khare, Malay Ghosh. Source: Bayesian Analysis, Volume 15, Number 1, 241--262.Abstract: The choice of tuning parameters in Bayesian variable selection is a critical problem in modern statistics. In particular, for Bayesian linear regression with non-local priors, the scale parameter in the non-local prior density is an important tuning parameter which reflects the dispersion of the non-local prior density around zero, and implicitly determines the size of the regression coefficients that will be shrunk to zero. Current approaches treat the scale parameter as given, and suggest choices based on prior coverage/asymptotic considerations. In this paper, we consider the fully Bayesian approach introduced in (Wu, 2016) with the pMOM non-local prior and an appropriate Inverse-Gamma prior on the tuning parameter to analyze the underlying theoretical property. Under standard regularity assumptions, we establish strong model selection consistency in a high-dimensional setting, where $p$ is allowed to increase at a polynomial rate with $n$ or even at a sub-exponential rate with $n$ . Through simulation studies, we demonstrate that our model selection procedure can outperform other Bayesian methods which treat the scale parameter as given, and commonly used penalized likelihood methods, in a range of simulation settings. Full Article
chi Hierarchical Normalized Completely Random Measures for Robust Graphical Modeling By projecteuclid.org Published On :: Thu, 19 Dec 2019 22:10 EST Andrea Cremaschi, Raffaele Argiento, Katherine Shoemaker, Christine Peterson, Marina Vannucci. Source: Bayesian Analysis, Volume 14, Number 4, 1271--1301.Abstract: Gaussian graphical models are useful tools for exploring network structures in multivariate normal data. In this paper we are interested in situations where data show departures from Gaussianity, therefore requiring alternative modeling distributions. The multivariate $t$ -distribution, obtained by dividing each component of the data vector by a gamma random variable, is a straightforward generalization to accommodate deviations from normality such as heavy tails. Since different groups of variables may be contaminated to a different extent, Finegold and Drton (2014) introduced the Dirichlet $t$ -distribution, where the divisors are clustered using a Dirichlet process. In this work, we consider a more general class of nonparametric distributions as the prior on the divisor terms, namely the class of normalized completely random measures (NormCRMs). To improve the effectiveness of the clustering, we propose modeling the dependence among the divisors through a nonparametric hierarchical structure, which allows for the sharing of parameters across the samples in the data set. This desirable feature enables us to cluster together different components of multivariate data in a parsimonious way. We demonstrate through simulations that this approach provides accurate graphical model inference, and apply it to a case study examining the dependence structure in radiomics data derived from The Cancer Imaging Atlas. Full Article
chi Modeling Population Structure Under Hierarchical Dirichlet Processes By projecteuclid.org Published On :: Wed, 13 Mar 2019 22:00 EDT Lloyd T. Elliott, Maria De Iorio, Stefano Favaro, Kaustubh Adhikari, Yee Whye Teh. Source: Bayesian Analysis, Volume 14, Number 2, 313--339.Abstract: We propose a Bayesian nonparametric model to infer population admixture, extending the hierarchical Dirichlet process to allow for correlation between loci due to linkage disequilibrium. Given multilocus genotype data from a sample of individuals, the proposed model allows inferring and classifying individuals as unadmixed or admixed, inferring the number of subpopulations ancestral to an admixed population and the population of origin of chromosomal regions. Our model does not assume any specific mutation process, and can be applied to most of the commonly used genetic markers. We present a Markov chain Monte Carlo (MCMC) algorithm to perform posterior inference from the model and we discuss some methods to summarize the MCMC output for the analysis of population admixture. Finally, we demonstrate the performance of the proposed model in a real application, using genetic data from the ectodysplasin-A receptor (EDAR) gene, which is considered to be ancestry-informative due to well-known variations in allele frequency as well as phenotypic effects across ancestry. The structure analysis of this dataset leads to the identification of a rare haplotype in Europeans. We also conduct a simulated experiment and show that our algorithm outperforms parametric methods. Full Article
chi Gaussianization Machines for Non-Gaussian Function Estimation Models By projecteuclid.org Published On :: Wed, 08 Jan 2020 04:00 EST T. Tony Cai. Source: Statistical Science, Volume 34, Number 4, 635--656.Abstract: A wide range of nonparametric function estimation models have been studied individually in the literature. Among them the homoscedastic nonparametric Gaussian regression is arguably the best known and understood. Inspired by the asymptotic equivalence theory, Brown, Cai and Zhou ( Ann. Statist. 36 (2008) 2055–2084; Ann. Statist. 38 (2010) 2005–2046) and Brown et al. ( Probab. Theory Related Fields 146 (2010) 401–433) developed a unified approach to turn a collection of non-Gaussian function estimation models into a standard Gaussian regression and any good Gaussian nonparametric regression method can then be used. These Gaussianization Machines have two key components, binning and transformation. When combined with BlockJS, a wavelet thresholding procedure for Gaussian regression, the procedures are computationally efficient with strong theoretical guarantees. Technical analysis given in Brown, Cai and Zhou ( Ann. Statist. 36 (2008) 2055–2084; Ann. Statist. 38 (2010) 2005–2046) and Brown et al. ( Probab. Theory Related Fields 146 (2010) 401–433) shows that the estimators attain the optimal rate of convergence adaptively over a large set of Besov spaces and across a collection of non-Gaussian function estimation models, including robust nonparametric regression, density estimation, and nonparametric regression in exponential families. The estimators are also spatially adaptive. The Gaussianization Machines significantly extend the flexibility and scope of the theories and methodologies originally developed for the conventional nonparametric Gaussian regression. This article aims to provide a concise account of the Gaussianization Machines developed in Brown, Cai and Zhou ( Ann. Statist. 36 (2008) 2055–2084; Ann. Statist. 38 (2010) 2005–2046), Brown et al. ( Probab. Theory Related Fields 146 (2010) 401–433). Full Article
chi A Kernel Regression Procedure in the 3D Shape Space with an Application to Online Sales of Children’s Wear By projecteuclid.org Published On :: Thu, 18 Jul 2019 22:01 EDT Gregorio Quintana-Ortí, Amelia Simó. Source: Statistical Science, Volume 34, Number 2, 236--252.Abstract: This paper is focused on kernel regression when the response variable is the shape of a 3D object represented by a configuration matrix of landmarks. Regression methods on this shape space are not trivial because this space has a complex finite-dimensional Riemannian manifold structure (non-Euclidean). Papers about it are scarce in the literature, the majority of them are restricted to the case of a single explanatory variable, and many of them are based on the approximated tangent space. In this paper, there are several methodological innovations. The first one is the adaptation of the general method for kernel regression analysis in manifold-valued data to the three-dimensional case of Kendall’s shape space. The second one is its generalization to the multivariate case and the addressing of the curse-of-dimensionality problem. Finally, we propose bootstrap confidence intervals for prediction. A simulation study is carried out to check the goodness of the procedure, and a comparison with a current approach is performed. Then, it is applied to a 3D database obtained from an anthropometric survey of the Spanish child population with a potential application to online sales of children’s wear. Full Article
chi Matching Methods for Causal Inference: A Review and a Look Forward By projecteuclid.org Published On :: Thu, 05 Aug 2010 15:41 EDT Elizabeth A. StuartSource: Statist. Sci., Volume 25, Number 1, 1--21.Abstract: When estimating causal effects using observational data, it is desirable to replicate a randomized experiment as closely as possible by obtaining treated and control groups with similar covariate distributions. This goal can often be achieved by choosing well-matched samples of the original treated and control groups, thereby reducing bias due to the covariates. Since the 1970s, work on matching methods has examined how to best choose treated and control subjects for comparison. Matching methods are gaining popularity in fields such as economics, epidemiology, medicine and political science. However, until now the literature and related advice has been scattered across disciplines. Researchers who are interested in using matching methods—or developing methods related to matching—do not have a single place to turn to learn about past and current research. This paper provides a structure for thinking about matching methods and guidance on their use, coalescing the existing research (both old and new) and providing a summary of where the literature on matching methods is now and where it should be headed. Full Article
chi Karachi Plague Committee in 1897. Album of photographs. By search.wellcomelibrary.org Published On :: 1897. Full Article
chi Rassegna trimestrale BRI settembre 2017: Le prospettive positive in un contesto di bassa inflazione alimentano l'assunzione di rischio By www.bis.org Published On :: 2017-09-17T16:00:00Z Italian translation of the BIS press release about the BIS Quarterly Review, September 2017 Full Article
chi Bigtech nel settore finanziario: opportunità e rischi By www.bis.org Published On :: 2019-06-23T16:00:00Z Italian version of BIS Press Release - Big tech in finance: opportunities and risks, 23 June 2019 Full Article
chi Wintrust Financial Corporation Announces Precautionary Decision to Help Achieve Community Health Objectives By Temporarily Closing Selected Branches By www.snl.com Published On :: Tue, 17 Mar 2020 11:00:00 GMT To view more press releases, please visit http://www.snl.com/irweblinkx/news.aspx?iid=1024452. Full Article