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NBA suspends Embiid three games for shoving columnist

Philadelphia 76ers center Joel Embiid was suspended by the NBA on Tuesday for three games without pay for shoving a member of the media.




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Russian Olympic Committee president to step down. Neutral athletes competed at Paris Games

The president of the suspended Russian Olympic Committee said Tuesday he plans to step down after six years in charge.




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Olympic medalist race walker Koki Ikeda of Japan suspended in doping investigation

Olympic silver medalist race walker Koki Ikeda of Japan has been provisionally banned for suspected blood doping, track and field's Athletics Integrity Unit said on Friday.





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Data paper describes Antarctic biodiversity data gathered by 90 expeditions since 1956

Huge data encompassed into a unique georeferenced macrobenthic assemblages database

A new peer-reviewed data paper offers a comprehensive, open-access collection of georeferenced biological information about the Antarctic macrobenthic communities. The term macrobenthic refers to the visible-for-the-eye organisms that live near or on the sea bottom such as echinoderms, sponges, ascidians, crustaceans. The paper will help in coordinating biodiversity research and conservation activities on species living near the ocean bottom of the Antarctic.
The data paper "Antarctic macrobenthic communities: A compilation of circumpolar information", published in the open access journal Nature Conservation, describes data from approximately 90 different expeditions in the region since 1956 that have now been made openly available under a CC-By license. The paper provides unique georeferenced biological basic information for the planning of future coordinated research activities, for example those under the umbrella of the biology program Antarctic Thresholds – Ecosystem Resilience and Adaptation (AnT-ERA) of the Scientific Committee on Antarctic Research (SCAR). The information collected could be also beneficial for current conservation priorities such as the planning of Marine Protected Areas (MPAs) by the Commission for the Conservation of Antarctic Marine Living Resources (CCAMLR).
The expeditions were organised by several famous explorers of the Antarctic. The area covered by the paper consists of almost the entire Southern Ocean, including sites covered by a single ice-shelf. The vast majority of information is from shelf areas around the continent at water depth shallower than 800m. The information from the different sources is then attributed to the classified macrobenthic assemblages. The results are made publicly available via the "Antarctic Biodiversity Facility" (data.biodiversity.aq).
A specific feature of this paper is that the manuscript was automatically generated from the Integrated Publishing Toolkit of the Antarctic Node of the Global Biodiversity Information Facility (AntaBIF IPT) and then submitted to the journal Nature Conservation through a novel workflow developed by GBIF and Pensoft Publishers. (see previous press release). Data are made freely available through the AntaBIF IPT, and sea-bed images of 214 localities through the data repository for geoscience and environmental data, PANGAEA- Data Publisher for Earth and Environmental Science (sample: http://doi.pangaea.de/10.1594/PANGAEA.198682).

Speaking from on board the research vessel 'Polarstern', the paper's lead author Prof. Julian Gutt of the Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research, Germany commented:
"The most important achievement of this paper is that data collected over many years and by various institutions are now not only freely available for anyone to download and use, but also properly described to facilitate future work in re-using the data. The Data Paper concept is certainly a great approach that multiplies the effect of funds and efforts spent by generations of scientists."
The data will also be used for a comprehensive Biogeography Atlas of the Southern Ocean project to be released during the XI SCAR Biology Symposium in Barcelona July 2013.
SOURCE: EurekAlert!




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A new generation database to help ecological research on marine organisms

Ecosystem functioning, or the role which organisms play in an ecosystem, is becoming increasingly important in marine ecological and conservation. To facilitate such studies an international team of scientists lead by S. Faulwetter from the Hellenic Centre for Marine Research (HMRC) present the Polytraitsdatabase that aims to provide re-usable, and accessible data on marine bristle worms. The paper describing the new database was published in the innovative Biodiversity Data Journal, a pioneer in the publication of integrated biological data.

Benthic organisms participate in a number of biological processes in world water basins. Their functional diversity is an important community property demonstrating the role organisms have in the ecosystem and helping to understand how the community reacts to environmental changes. Polychaetes, or bristle worms, are marine worms famous for their peculiar shapes and often vivid coloration. More than 10,000 species are described in the class worldwide, most of which living in the shelf zone of the seas and oceans, burrowing in the sediment or swimming among the plankton.

At present, the Polytraits database contains almost 20,000 records on morphological, behavioural and reproductive characteristics of more than 1,000 species, all referenced by literature sources. All data on these engaging organisms can be freely accessed through the project website in different ways and formats, both human-readable and machine-readable. The new database presents a rich and easy to use collection, which cover morphological, reproductive and behavioural characteristics of polychaetes, as well as information on environmental preferences in an attempt to facilitate ecological research and conservation studies.

The researchers also provide a leading-edge approach to accessing, integrating and re-using the data. Through programming interfaces, the life-cycle information is automatically integrated into the Polychaetes Scratchpads, together with other data on polychaetes. Scratchpads are easy to use, adaptable, and provide powerful tools for managing biodiversity data. This taxon-centric virtual research environment allows browsing the taxonomic classification and retrieving various kinds of relevant information for each taxon, among which are also the collected biological traits.

Furthermore, the data are also accessible through Encyclopedia of Life's TraitBank which currently features over 3 million records related to more than 250 attributes for 272,720 taxa, including the Polytraits data. TraitBank serves as a provider for aggregated species trait data. All data uploaded there are archived and integrated with trait information from other sources to address issues of standardization of scientific data. This is the first complex database for marine organisms to be published in such an innovative way and demonstrates yet another example of collaboration between the data publisher Pensoft and Encyclopedia of Life.

 





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Stakeholder engagement and implementation of EU BON: WP6/WP7 kick-off, Leipzig, Germany

The official kick-off of the EU BON project WP6 Stakeholder engagement and science-policy dialogue and WP7 Implementation of GEO BON: strategies and solutions at European and global levels took place on 18-19 February 2014 in Leipzig, Germany. The two work packages are a crucial part of the project outlining the future actions towards ensuring the integration of the project with its global counterpart GEO BON, as well as paving the road towards successful stakeholder and policy engagement.

As a result of this first meeting further short-term and long-term steps were outlined for WP6 and WP7 towards the achievement of main project objectives. These steps include shaping the future EU BON GEO BON interactions and EU BON’s approach towards stakeholder engagement.

In the following interview Ilse Geijzendorffer gives an insight on the outcomes from the meeting.

This image shows the discussions during the WP6/WP7 kick-off meeting. Credit: Eugenie Regan

1) What are the project’s main stakeholders that you are planning to approach and interact with in the future?

EU BON aims to develop a blue print for a data infrastructure for data handling, storage, indicator computation and transfer of knowledge via a data portal available to knowledge seekers. This data infrastructure thus has to be useful to data holders who want their data to be used (e.g. citizen scientists, nature associations, scientists) and to those that seek knowledge (e.g. reporting bodies). EU BON reaches out to these stakeholders and to bodies that would be interested to host or have such a data infrastructure themselves. Our first stakeholder round table focused on European knowledge seekers and existing data portals. Our second stakeholder round table planned for this summer will focus on citizen scientists and the organisations that currently handle the citizen science data, to receive input on what these two stakeholder groups would like to see in such a data infrastructure blue print.

At the same time we reach out to ongoing platforms that consist of networks of knowledge and that have needs regarding their data flow. A very important partner in the data infrastructure development is GEO BON. The coordination of GEO BON has just changed and EU BON will reinforce the ties with GEO BON during the General Assembly in Crete coming in April.

2) Science-policy dialogue proves to be a crucial part for the success of large scale projects like EU BON, how are you tackle this challenge?

The objective of EU BON is a moving target in the sense that the blue print for data infrastructure will need to suit the needs for current and future monitoring. Additionally, the actual implementation, funding and hosting of such an infrastructure could be within a structure that may not yet exist in that form today. Changes in mission, coordination and targets occur constantly. To profit from lessons learned, we are in close contact with the Biodiversity Knowledge Project; a project that has already gained experience in the last four years in identifying the most important elements for handling data requests from knowledge seekers and in developing a suitable management plan.

For EU BON to achieve and reach its moving target, we keep in touch with the changes within the biodiversity knowledge landscape (e.g. progress in IPBES, CBD reporting, European targets ad evaluations); we explore multiple scenarios for the data infrastructure, the business plan and the implementation options; and we collaborate with a large range of stakeholders to include not only their ideas and needs, but also the transitions that they go through.

 





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Article Alert: Scientific names of organisms: attribution, rights, and licensing

Background: As biological disciplines extend into the ‘big data’ world, they will need a names-based infrastructure toindex and interconnect distributed data. The infrastructure must have access to all names of all organisms if it is to manage all information. Those who compile lists of species hold different views as to the intellectual property rights that apply to the lists. This creates uncertainty that impedes the development of a much-needed infrastructure for sharing biological data in the digital world.
 
Findings: The laws in the United States of America and European Union are consistent with the position that scientific names of organisms and their compilation in checklists, classifications or taxonomic revisions are not subject to copyright. Compilations of names, such as classifications or checklists, are not creative in the sense of copyright law. Many content providers desire credit for their efforts.
 
Conclusions: A ‘blue list’ identifies elements of checklists, classifications and monographs to which intellectual property rights do not apply. To promote sharing, authors of taxonomic content, compilers, intermediaries, and aggregators should receive citable recognition for their contributions, with the greatest recognition being given to the originating authors. Mechanisms for achieving this are discussed.
 
Original Source:  Patterson et al. Scientific names of organisms: attribution, rights, and licensing, BMC Research Notes 2014, 7:79. doi: 10.1186/1471-2105-12-S15-S1 

Full article available at: http://dx.doi.org/10.1186/1471-2105-12-S15-S1 

 





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From Barcode of Life Data Systems to scholarly publishing systems: a case study with ten Nearctic species of Microgastrinae

An innovative workflow reveals new research potential of the Barcode of Life Data Systems (BOLD). A recently published article in the Biodiversity Data Journal (BDJ) used specimen records downloaded from BOLD in tabular format and imported these into a human-readable text developed in manuscript within the Pensoft Writting Tool (PWT). Data were used to study the species distributions of ten Nearctic species of braconid wasps from the Microgastrinae subfamily.

BOLD is originally designed to support the generation and application of DNA barcode data. However, the repository also holds unexplored treasures of additional data that provide unique potential for many other research uses.

Currently almost 4 million sequences (over 3.4 million of them DNA barcodes) are stored in BOLD, including coverage for more than 143K animal species, 53K plant species, and 16K fungi and other species, and this impressive storage of information is continuing to grow every day.

A team of researchers, led by Dr Jose Fernandez-Triana from the University of Guelph, Canada, have now explored how the unique amount of data stored on the BOLD platform can be utilised for new research purposes. Choosing tiny parasitic wasps for their case study they selected a sample of 630 specimens and 10 North American species. Data stored on BOLD were then used to uncover a significant number of new records of locality, provinces, territories and states.

The research was then secured a fast publication via BDJ, a community peer-reviewed, open-access, comprehensive online platform, designed to accelerate publishing, dissemination and sharing of biodiversity-related data of any kind.

"Import of structured data into human-readable text is important but it does not represent the whole story. More importantly, the data can be downloaded straight from the article text by anyone for further re-use, or be automatically exported to data aggregators, such as the Global Biodiversity Information Facility (GBIF). In this way, data platforms could get more peer-reviewed content from scholarly publications and scientists will be properly credited for their efforts" said Prof. Lyubomir Penev, founder of Pensoft Publishers.

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Original Source:

Fernandez-Triana J, Penev L, Ratnasingham S, Smith M, Sones J, Telfer A, deWaard J, Hebert P (2014) Streamlining the use of BOLD specimen data to record species distributions: a case study with ten Nearctic species of Microgastrinae (Hymenoptera: Braconidae). Biodiversity Data Journal 2: e4153. doi: 10.3897/BDJ.2.e4153

Additional information:

The workflow is part of the Data Publishing Toolkit elaborated within the EU FP7 funded project EU BON (Grant agreement No 308454).

 





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Gap analysis and priorities for filling identified gaps in data coverage and quality

High-quality biodiversity data is essential for answering key questions on biodiversity in Europe, for example regarding the state and trends of species or for evaluating ecosystem services and functions on various scales. A new EU BON report "Gap analysis and priorities for filling identified gaps in data coverage and quality" evaluates the state of available biodiversity information and points out gaps of available biodiversity information sources.

The report aims to assess relevant data sources on biodiversity on a European and global scale. The assessment particularly evaluates the gaps of available biodiversity information sources and, after outlining the most important ones, identifies priorities for improving the data availability and gives recommendations of how they can be closed.

The report is divided into three main sections, starting first with an overall overview of gaps and limitations of biodiversity datasets. After outlining some general limitations of biodiversity data in Europe, the key findings from the specific analyses are summarized along with recommendations of how existing gaps can be closed. The last part presents a chapter containing the specific gap analysis for a selection of several main global and European datasets. The datasets represent some main sources for biodiversity data, either for specific realms (terrestrial, marine, freshwater), taxonomic groups, thematic fields (taxonomy, genetic databases) or networks of European test sites.

 





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Bridging the gap between biodiversity data and policy reporting needs: An EBV perspective

Reporting under policy instruments to inform on the trends in biodiversity requires information from a range of different elements of biodiversity, from genetically viable populations to the structure of ecosystems. A new research looks into the Essential Biodiversity Variables as an analytic framework to identify ways in which gaps between biodiversity data and policy reporting needs could be bridged. The study was published in theJournal of Applied Ecology.

The Essential Biodiversity Variables (EBVs, Pereira et al. 2013) which were previously developed by ecology experts in GEO BON, is as a list of the most essential elements that need to be monitored worldwide, if we want to know how biodiversity is really changing.Example of essential variables is the population abundances of species (like the Living Plant Index from the WWF) or the extent of habitat fragmentation.

In the recently published study, funded by the EU FP7 project EU BON, scientists used the identified EBVs as a framework to analyse the gaps between the biodiversity objectives stated in international policy instruments, the indicators used to develop the related policy reports and the data that is actually available to quantify indicators and proxies.

Results of the recently published study show:

1) which aspects of biodiversity are being asked for the reporting on policy instruments. Based on this knowledge,it became apparent which aspects of biodiversity are not often asked to be in these reports and thus for which aspects policy makers are unlikely to receive information. For example information on the changes in the EBV class "Genetic Composition", was not often asked in reports, not often used in indicators and little data is directly available.

2) which of these biodiversity aspects actually end up being in the CBD reports, because scientists were able to quantify indicators. For instance, information for Ecosystem function is often asked for, but is not represented by many indicators.

3) for some EBVs data seems available to improve current reporting efforts, for instance for indicators on Ecosystem structure.

Additionally, the study identified which potentially available data could be used to improve existing indicators by adding more taxa or spatial or temporal coverage. This analysis also showed that the EBVs will not cover all the information asked in policy reporting. This is because the policy objectives also include things related to awareness raising of the public and the implementation of protection measures - aspects which are not within the scope of EBVs.

"Analytical properties, such as an identification of which data and indicators are relevant per EBV, will need to be addressed before EBVs can actually become operational and facilitate the integration of data flows for monitoring and reporting." commented the lead author of the study Dr. Ilse Geijzendorffer.

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Original Source:

Geijzendorffer, I.R., Regan, E.C., Pereira, H. M., Brotons, L., Brummitt, N., Gavish, Y., Haase, P., Martin, C.S., Mihoub, J.-B., Secades, C., Schmeller, D.S., Stoll, S., Wetzel, F. T., & Walters, M.,Journal of Applied Ecology http://onlinelibrary.wiley.com/doi/10.1111/1365-2664.12417/abstract

Additional information:

Pereira, H.M., Ferrier, S., Walters, M., Geller, G.N., Jongman, R.H.G., Scholes, R.J. M. W. Bruford, Brummitt, N. , Butchart, S.H.M., Cardoso, A.C., Coops, N.C., Dulloo, E., Faith, D.P., Freyhof, J., Gregory, R.D., Heip, C., Höft, R., Hurtt, G., Jetz, W., Karp, D.S., McGeoch, M.A., Obura, D., Onoda, Y., Pettorelli, N., Reyers, B., Sayre, R., Scharlemann, J. P. W., Stuart, S.N., Turak, E., Walpole, M., & Wegmann, M. (2013) Essential biodiversity variables. Science, 339, 277-278.





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New life for old data: Integrating and visualizing primary biodiversity data from prospective and legacy taxonomic literature

XML markup of taxonomic research and specimen data is a valuable tool for structuring the incessantly accumulating biodiversity knowledge. It allows for the opportunity to collectively use the currently fragmented information for more detailed analysis.

A new research paper, published in theBiodiversity Data Journal, demonstrates how XML markup using GoldenGATE can address the challenges presented by unstructured legacy data, like those presented in the widely used PDF format. The paper demonstrates how structured primary biodiversity data can be extracted from such legacy sources and aggregated with and jointly queried with data from other Darwin Core-compatible sources, to present a visualization of these data that can communicate key information contained in biodiversity literature.

Specimen data in taxonomic literature are among the highest quality primary biodiversity data. Innovative cybertaxonomic journals such as the Biodiversity Data Journal are using workflows that preserve the data's structure and semantic specificity and disseminate electronic content to aggregators and other users that makes these data reusable.

Such structure however is lost in traditional taxonomic publishing and currently, access to that resource is cumbersome, especially for non-specialist data consumers.

The question is: how do you manage this vast distributed repository of knowledge about biodiversity to make it easily available reusable for future research?

To answer this challenge this project queried XML structured articles published in Biodiversity Data Journal along with historical taxonomic literature marked up using GoldenGATE, and represents the results as a series of standard charts. XML structured documents are maintained by the Swiss NGO Plazi and are freely available online.

In such form, data associated with specimens becomes much more valuable as it can reveal key information about a particular species, and even about the scientists who investigate them. Charts indicate at a glance, for example, what time of year and elevation range a species is likely to be found at, useful information if you want to search for it in the field.

Our accumulated biodiversity knowledge includes an estimated 2-3 billion specimens in natural history collections and 500 million pages of printed text. These are the data we need to answer questions that are relevant to our world today, like setting conservation priorities and anticipating the effects of climate change on biodiversity and ecosystem functions that affect the lives of people.

"In short, we have half a billion pages worth of biodiversity knowledge and are just learning how to query it. The real power comes when data from many articles are combined, queried, and reused for new purposes. Potential applications span the scientific, policy, and public spheres. When we all have better access to the information that already exists in the global corpus of biodiversity literature, this helps us do a better job of exploring what we don't know and wisely applying what we do." explains the lead author Dr Jeremy Miller, Naturalis Biodiversity Center.

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This project was supported by pro-iBiosphere and EU BON, two FP-7 (European Union Seventh Framework Programme, 2007-2013) grants (No 312848 and 308454).

Original source:

Miller J, Agosti D, Penev L, Sautter G, Georgiev T, Catapano T, Patterson D, King D, Pereira S, Vos R, Sierra S (2015) Integrating and visualizing primary data from prospective and legacy taxonomic literature. Biodiversity Data Journal 3: e5063. doi: 10.3897/BDJ.3.e5063

 





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Museum für Naturkunde & the Botanic Garden and Botanical Museum are hosting two events in June, 2016

The Museum für Naturkunde and the Botanic Garden and Botanical Museum are honored to be hosting the 31st Annual Meeting of the Society for the Preservation of Natural History Collections (SPNHC) as well as the 2nd International Conference on Biodiversity Biobanking of the Global Genome Biodiversity Network (GGBN) in Berlin from June, 20 to June, 25, 2016. The conferences will be held in parallel at the andel’s Hotel Berlin, Landsberger Allee.

The registration for both conferences is now open. Please check the conference web sites for information on the conference program, field trips, social events, accommodation, registration and abstract submission. All social events and field trips as well as the opening session on Tuesday are joint events for attendees of both conferences. During lunch and coffee breaks one will have the chance to visit the vendor booths and chat with attendees of both conferences. The sessions of both conferences cover complementary topics to avoid duplications.

 





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Online consultation to fill gaps in the global indicator framework for the Aichi Biodiversity Targets

The Biodiversity Indicators Partnership (BIP) Secretariat is looking for indicators to fill gaps in the global suite of biodiversity indicators and allow a full understanding of progress towards globally agreed targets.

They are inviting experts and organisations to participate in an open online consultation to fill the gaps in the global indicator framework for the Strategic Plan for Biodiversity 2011-2020. Through this short online survey they want to hear about any existing indicators (both global and sub-global in scale), indicators under development, potentially useful datasets or key experts or organisations in the fields. The main focus is on indicators that respond to the gaps in the global framework, which are listed on the attached flyer, but they are also keen to hear about any other indicators that could potentially enhance the existing indicator suite.

The consultation is open until 30 June 2016. Further information on the consultation is available in the attached flyer, the BIP website http://www.bipindicators.net/gaps, and the CBD notification SCBD/OES/RH/KNM/85710.





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EU BON workshop "Biodiversity research for and by citizens in Eastern Europe: tools, information services and public engagement"

The EU BON workshop "Biodiversity research for and by citizens in Eastern Europe: tools, information services and public engagement" was organized to present the EU BON citizen science gateway, share accomplishments of the project, promote products, raise and discuss challenges of citizen science and facilitate networking between countries, especially eastern and central European countries.

There were 33 participants from Baltic countries and Finland and EU BON partners from Norway, Spain, Israel and Brussels. First day was showcasing the citizen science initiatives in Estonia, following best practice examples from EU BON consortium. During the second day the participants got a chance to learn the tools and methods for citizen science data management by ECSA and EU BON. This was followed by world cafe style discussion about the needs of citizen science initiatives and Pan-European citizen science gateway. One of the important conclusions for Baltic countries is that there is a need for stronger collaboration and supportive infrastructure to make citizen science more effective and also deliver accessible data to research community.

Some workshop participants also took part of Tartu Mini-BioBlitz on 29th June, first BioBlitz in Estonia. BioBlitz participants observed 239 species of animals, plants and fungi .

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Workshop agenda

Read a first hand report form the workshop in the two great blog posts by Egle Marija Ramanauskaite (a workshop participant from Lithuania):

http://seplute.tumblr.com/post/146841955105/citsci-overtakes-the-baltics-citizen-science

http://seplute.tumblr.com/post/146844410470/citizen-science-workshop-in-tartu-recap-of-day-2





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EU BON digital identifiers for fungal species in Science

A recent article in the academic journal Science published by Prof. Urmas Kõljalg and colleagues aims to explain the possibilities for identifying species determined based on DNA samples only.

The article was published as a response to David Hibbetts paper "The invisible dimension of fungal diversity". The American mycologist Hibbett argues that huge amount of fungal species cannot be identified and described scientifically as the international code does not permit describing new species based on DNA samples derived from molecular surveys of the environment. However, the Estonian and Swedish scientists show – analysing the same data – how DNA based fungal species have been identified and communicated for several years now using database UNITE (https://unite.ut.ee).


In the forests of Laos the mushroom season has already begun.  Among the mushrooms presented on these dishes one can most likely also find species scientifically yet undescribed. The digital object identifiers (DOIs) system created by the scientists in Tartu permits comunication of these species already before they have been granted scientific names. Writing about poisonous mushrooms for example helps to keep people informed, so that cases of intoxication can be avoided more often. (Photo: Urmas Kõljalg)

"Traditionally species are determined based on their morphology and anatomy, in printed books – traditional keys to nature – species are displayed on pictures and in written descriptions. But DNA of fungi can also be found in samples of soil, of leaves, of air, in these circumstances we do not actually have the fungus itself and we cannot identify it visually," Urmas Kõljalg explains the core of the matter. "In this case, species can be determined evaluating their DNA sequences."

The UNITE Species Hypotheses approach demonstrates how the DNA based fungal species can be referred to in a proper scientific manner already before they have been described formally according to the code. This can be done using unique digital object identifiers (DOIs) given to all fungal species in the UNITE database. This keeps all the references automatically connected and machine-readable by other databases as well.

"Even if the species will have its name ten years from now, the DOI code will help us go back and see, where the species was first described and who found it," Urmas Kõljalg says.

For several years now by leading species classification platforms based on DNA sequences more than half a million DOI codes have been used as identifiers of fungal species. UNITE fungal codes are used by the most influential gene bank NCBI also. The UNITE system uses a new paradigm in identifying species, this paradigm was first described by Urmas Kõljalg and colleagues in 2013.

UNITE – the global unified system for the DNA based fungal species – contains information of all the fungal species known from sequence data, hundreds of researchers from all over the world are collaborating. UNITE is hosted by PlutoF cloud, which permits creating very complex databases for various biodiversity data, including DOIs. The development of PlutoF system is supported by the Estonian research infrastructures roadmap project NATARC (http://natarc.ut.ee), EU BON (http://eubon.eu), etc. All scientists can use PlutoF for free.





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New RIO contribution: Summary report and strategy recommendations for EU citizen science gateway for biodiversity data

A new report has been added to the dedicated EU BON Outputs Collection in the innovative RIO journal. The paper reviews biodiversity related citizen science in Europe, specifically the data mobilization aspect and gives an overview of citizen science related activities in the project EU BON.

In addition, recommendations for a Pan-European citizen science gateway and data mobilization efforts will be given, with the aim of filling in existing biodiversity data gaps. Also the EU BON citizen science gateway is described, which is a part of the European Biodiversity Portal (http://biodiversity.eubon.eu) with citizen science related products. 

Citizen science is a vital element for EU BON with regards to biodiversity information sources that provide data for research and policy-making. CS data are used by many research institutes, public organisations and local data portals. CS data offer volumes of field data, which would otherwise not be possible to collect with the limited resources of research institutes and agencies. Thus one of the main targets for EU BON is to make CS data available through various efforts, for example through networking and by using new technologies for data mobilisation. Overall, one of the main goals of a common EU citizen science Gateway is to integrate CS data for European biodiversity research. EU BON also seeks to develop a strategy for achieving this goal and encourages educational aspects of citizen science through networking and the development of tools.

Original Source:

Runnel V, Wetzel F, Groom Q, Koch W, Pe’er I, Valland N, Panteri E, Kõljalg U (2016) Summary report and strategy recommendations for EU citizen science gateway for biodiversity data. Research Ideas and Outcomes 2: e11563. https://doi.org/10.3897/rio.2.e11563





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New EU BON research reviews the most relevant sources for European biodiversity observation data to identifying important barriers and fill gaps

Recently published in Biological Conservation, the new EU BON supported paper is titled "Unlocking biodiversity data: Prioritization and filling the gaps in biodiversity observation data in Europe".
 
Abstract:
 
Large quantities of biodiversity data are required to assess the current status of species, to identify drivers of population and distributional change, and to predict changes to biodiversity under future scenarios. Nevertheless, currently-available data are often not well-suited to these purposes. To highlight existing gaps, we assess the availability of species observation data in Europe, their geographic and temporal range, and their quality. We do so by reviewing the most relevant sources for European biodiversity observation data, and identifying important barriers to filling gaps. We suggest strategies, tools and frameworks to continue to fill these gaps, in addition to producing data suitable for generating Essential Biodiversity Variables (EBVs). Our review of data sources shows that only around a third of data-providers provide unrestricted data access. Particularly large geographic gaps exist in Eastern European countries and many datasets are not suitable for generating EBVs due to the absence of long-term data. We highlight examples built on recent experiences from large data integrators, publishers and networks that help to efficiently improve data availability, adopt open science principles and close existing data gaps. Future strategies must urgently consider the needs of relevant data stakeholders, particularly science- and policy-related needs, and provide incentives for data-providers. Hence, sustainable, longterm infrastructures and a European biodiversity network are needed to provide such efficient workflows, incentives for data-provision and tools.
 
 

 





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Satellite navigation - Workshop: EGNSS research and technology development

Place: Brussels (Belgium)
 
The workshop on European Global Satellite System (GNSS) Research and Technology Development (RTD) will be organised by the European Commission in collaboration with the European Space Agency (ESA) and the European GNSS Agency (GSA).
This event is being held to consult stakeholders of the European GNSS community on RTD areas of potential interest to be funded under Horizon 2020 in the period 2015-2020.
The scope includes Galileo/ EGNOS infrastructure, mission and services R&D, GNSS signals,  and basic GNSS RTD.
Please note that receiver and applications R&D will not be covered in this workshop
The workshop will consist of six topical sessions, during which stakeholders from industry, SMEs, academia, and technology institutes are solicited to discuss and define important lines of GNSS research.




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SUSTAIN-EU-ASEAN cluster meting: organic and non-organic resourches & climate actions and cities

SUSTAIN-EU-ASEAN organises the first bi-regional cluster meeting during which projects from both Southeast Asia and Europe can meet in person! This cluster meeting will take place in Bogor, Indonesia on 19 Aug 2014, in parallel with the ASEAN Science and Technology Week (ASTW). The two tematic clusters are:
  • Climate Action and Cities: this cluster brings together a number of projects dealing with the effects of climate change on urban space (also referring to issues like water management, etc.)
  • Organic and Non-Organic Resources: this cluster contains projects that deal with a range of resources and materials problems crucial for economic and social well-being in Southeast Asia
Purpose of the meeting/Goals:
 
  • Meet and get to know fellow projects working on similar topics of relevance to ASEAN
  • Discuss results and synergies, exchange on methodologies, plan for joint events, applications, publications, etc. or simply see what's going on in the other region in this topic.
  • Plan concrete next joint steps with projects in the cluster.
  • Benefit from SUSTAIN EU-ASEAN support (e.g. in your dissemination, exploitation and development activities) and inputs (on the funding environment)
  • Share your views on thematic gaps in current research - SUSTAIN is mandated to carry the message to the European Commission
Find more information in the attached brochure.

 

 





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European Geosciences Union General Assembly - incl. Workshop Aggregation and coordination of Earth observation networks.

European Geosciences Union
General Assembly 2015
Vienna | Austria | 12 – 17 April 2015

http://www.egu2015.eu/home.html

 

One Workshop partiicluarly relevant for EU BON: ESSI2.17 Aggregation, consolidation and coordination of Earth observation networks. Harmonization and gaps

Convener: Joan Masó
Co-Convener: Ivette Serral


Abstract
We are investing in many efforts in creating pan-European or global EO thematic networks but are managed independently and coordination between them is limited. Europe is investing in the Sentinel constellation an at the same time, several initiatives are setting out to create, maintain and operationalize networks of in-situ sensors. These observation networks are usually conceived with a specific purpose in mind (e.g., air quality monitoring in the main cities or coastal water contamination), and they often lack a general coverage, are scattered irregularly in the territory, and sometimes are removed when the measurement campaign ends. There is a need for integrating systems and coordinating them more efficiently, explore synergies and make progress in harmonized and extend them.
Some initiatives aim to coordinate several themes into a single observation set. This is the case of the Critical Zone Exploration (the Earth’s outer layer from vegetation canopy to the soil and groundwater that sustains human life). The CZEN (Critical Zone Exploration Network; http://www.czen.org) is a network of field sites investigating processes within the Critical Zone.

This session is asking for presentations on the coordination between observation network examples and solutions to overcome technical and political barriers that help to reduce the cost and increase value by combining and sharing structures. Papers discussing gaps or redundancies in the current Earth observation networks are also welcome.

 

http://meetingorganizer.copernicus.org/EGU2015/session/18560





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GBIF GB22, Nodes Training Sessions & Global Nodes Meeting, Madagascar

The official Governing Board meeting, including the GBIF symposium, will take place on 8-10 October in Antananarivo, Madagascar. Prior to that there will be Training sessions for Nodes on 4-5 October, followed by the Global Nodes Meeting on 6-7 October. Committee meetings will take place on 6 October.

A special symposium will be hosted on 7 October where all delegates are invited to attend. After the Governing Board meeting, on 11 October, there is a possibility to visit the Andasibe National Park.  





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Biodiversity research for and by citizens in Eastern Europe: tools, information services and public engagement

Citizens in democratic society are no longer just passive bystanders when science is in focus. They show interest in results, ask for consultation and contribute with data. For many fields of research citizen science data are valuable additional information.
 
The FP7 project Building the European Biodiversity Observation Network - EU BON (http://eubon.eu/) now organizes a dedicated Citizen Science Workshop to explore the opportunities and tools for citizens in Eastern Europe to engage in biodiversity research. The workshop will take place on 27-28 June 2016 at the University of Tartu Natural History Museum, Estonia.
 
Engaging citizens is a challenge both for society and for researchers. There are new tools and methods which allow to manage citizen science projects, collect data and provide feedback to citizen scientists. The workshop will present EU BON results of citizen science mobilizing efforts for biodiversity research, provide training for citizen science tools and showcase some examples of Estonian projects and European initiatives. Workshop will also make an effort to prioritize recommendations and next steps for citizen science integration into biodiversity research.
 
To view the programme, learn more and subscribe, please visit the event's webpage here: http://eubon.cybertaxonomy.africamuseum.be/CS%20workshop




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ConnectinGEO Workshop on Gap Analysis and Prioritization

 

The ConnectinGEO Workshop on Gap Analysis and Prioritization will will take place on 10 & 11 October 2106 in Asutia to address key issues associated with the societal benefits of Earth observations and the exploitation of Earth observation for societal policy and decision making.

The Gap Analysis workshop will discuss the outcomes of the gap analysis and prioritization performed in the ConnectinGEO project. This gap analysis was guided by the information and knowledge needs resulting from humanity's "Road to Dignity" detailed in the Agenda 2030 and specified in the 17 Sustainable Development Goals (SDGs) agreed upon by the United Nations. Both the monitoring and implementation of actions to achieve these goals require extensive support from Earth observation and science communities. Several directives and crosscuting issues in Europe provided further guidance for the gap analysis.

The workshop will provide a forum to review the methodology for gap analysis and prioritization, discuss the relevant gaps and priorities in the European Earth observation networks and develop a strategy to address those gaps that have a high priority assigned.

The objectives of the gap analysis and prioritization workshop are to:

  • Assess the ConnectinGEO methodology for gap analysis and prioritization;
  • Review the list of gaps identified and the prioritization achieved;
  • Produce a final list of gaps with high priority;
  • Discuss a strategy to address these gaps and provide recommendations for the European Network of Earth Observation Networks (ENEON) and the European Commission concerning high-priority gaps.

More on the event's website.









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The Met Gala was in full bloom with Zendaya, Jennifer Lopez, Mindy Kaling among the standout stars

At her first Met Gala, Ayo Edebiri showed out in a youthful white look fading into a garden full of colorful flowers at the bottom by Loewe.

The post The Met Gala was in full bloom with Zendaya, Jennifer Lopez, Mindy Kaling among the standout stars appeared first on Boston.com.








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Scientific names of organisms: attribution, rights, and licensing





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Bridging the gap between biodiversity data and policy reporting needs: An Essential Biodiversity Variables perspective




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Integrating and visualizing primary data from prospective and legacy taxonomic literature





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Streamlining the use of BOLD specimen data to record species distributions: a case study with ten Nearctic species of Microgastrinae (Hymenoptera: Braconidae)




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Fauna Europaea: Neuropterida (Raphidioptera, Megaloptera, Neuroptera)




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Digital identifiers for fungal species




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D1.2 Summary report and strategy recommendations for EU citizen science gateway for biodiversity data




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D6.1 Report on stakeholder engagement for integrated biodiversity information




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Summary report and strategy recommendations for EU citizen science gateway for biodiversity data




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Sulfate-reducing microorganisms in a Mediterranean lagoonal complex (Amvrakikos Gulf, Ionian Sea)




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Unlocking biodiversity data: Prioritization and filling the gaps in biodiversity observation data in Europe




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A voter-approved Maine limit on PAC contributions sets the stage for a legal challenge

The Maine initiative doesn't attempt to limit independent spending on behalf of candidates. It focuses instead on limits on individual donations to super PACS, an area the Supreme Court has not ruled on, observers say.

The post A voter-approved Maine limit on PAC contributions sets the stage for a legal challenge appeared first on Boston.com.