o New Search Function Released By www.ncbi.nlm.nih.gov Published On :: Fri, 24 Jul 2009 08:00:00 EST You can now find embargoed articles and their corresponding PMCIDs through a recently released search option in the PMC Entrez database. Using the “Limits” tab, click in the field, “Show both free and embargoed articles” and refine your search by journal, author, date, article type, and/or tag term, as needed. Once you’re on the summary page, click on the “embargoed” tab at the top to find the articles in this category. You can then find the PMCID and date of availability at the bottom of the article citation, as indicated in the example below. Note: The PMC search option only includes articles with an initial embargo of up to 12 months. Articles with an embargo greater than 12 months are not compliant with the NIH Public Access Policy and will appear in search results only when the full text is free in PMC. For more information, see the article in the September-October issue of the NLM Technical Bulletin. Full Article
o PMC Adds New Page on Public Access By www.ncbi.nlm.nih.gov Published On :: Thu, 1 Oct 2009 08:00:00 EST A new page, Public Access & PMC, has now been added to the About PMC section of the PubMed Central site. “Public Access & PMC” provides information on the relationship between PMC and the NIH Public Access policy, including the difference between the NIH Public Access journal list and PMC journal list. In particular, authors and publishers should find this new site to be a useful resource. Full Article
o PMC Now Offers a “Preview” Table of Contents for Embargoed Issues By www.ncbi.nlm.nih.gov Published On :: Wed, 28 Oct 2009 08:00:00 EST For any journal issue that has at least one open access or early access article, PMC is now displaying the table of contents (TOC) in advance of the whole issue becoming available. Not to worry, though—only those articles specified for early release are immediately viewable in PMC. As consistent with the terms of access in the journal agreement, the other articles will only become available on their specified release date, as shown in the TOC below. The journal's accessiblity, as indicated on the PMC Journal list also has not changed; for example, Plant Physiology's embargo period is still 12 months. What has changed is that the issues with “preview” TOCs now additionally appear on the journal's archive page. Publishers and others can rest assured, however, that no access terms for any journal have been changed with the unveiling of this new format. Full Article
o New Members for PMC Advisory Committee By www.ncbi.nlm.nih.gov Published On :: Wed, 24 Feb 2010 08:00:00 EST Four new members have been appointed to serve on the PMC National Advisory Committee: Mike Rossner of Rockefeller University Press, Jan Fassler of the University of Iowa, Ivy Anderson of the California Digital Library, and Delores Meglio from the Knovel Corporation. Each member will serve a 4-year term. The next meeting of the committee is scheduled for June 4, 2010. For more information on the committee, see PMC National Advisory Committee. Full Article
o PMC Canada's Manuscript Submission System Goes Live! By www.ncbi.nlm.nih.gov Published On :: Thu, 29 Apr 2010 08:00:00 EST The PMC Canada manuscript submission system was released on April 28, 2010. The system will enable researchers funded by the Canadian Institutes of Health Research to deposit their peer-reviewed research publications, in compliance with CIHR's Policy on Access to Research Outputs. Full Article
o First-Ever Journal Article Tag Suite Conference (JATS-Con) to be Held in November 2010 By www.ncbi.nlm.nih.gov Published On :: Thu, 17 Jun 2010 08:00:00 EST PMC is pleased to announce the first of what we hope will be an annual series of conferences for users of the Journal Article Tag Suite, that is, for users of any of the “NLM DTDs”. The Journal Article Tag Suite Conference (JATS-Con) is a peer-reviewed conference that will feature a broad range of content on the Tag Suite—from the technical components to publishing theory—as well as the latest news on the Tag Suite. The conference will be hosted by the National Center for Biotechnology Information (NCBI) at the National Library of Medicine on the NIH campus in Bethesda, Maryland on November 1 & 2, 2010. For more information on the conference, see https://jats.nlm.nih.gov/jats-con. Note: There is no charge for the conference; however, space is limited so preregistration is required. Full Article
o PMC Hits Two Million Mark!! By www.ncbi.nlm.nih.gov Published On :: Fri, 25 Jun 2010 08:00:00 EST It's official—PMC has just become home to two million articles! The record-breaking article, which came from the American Journal of Medical Genetics Part B: Neuropsychiatric Genetics, became publicly available in the PMC archive on June 23. This new PMC milestone has occurred almost three years to the day since PMC reached its last one: the one-million article mark in June 2007. See also: PubMed Central Hits One Million Article Mark. Full Article
o A New Look and Feel for PMC's Public Access Page By www.ncbi.nlm.nih.gov Published On :: Tue, 14 Sep 2010 08:00:00 EST The Public Access & PMC page has been redesigned for greater clarity and usability. In addition to including a list of the FAQs at the top, the new page features a table illustrating all the ways to find various reference numbers for an article: the PMID, NIHMSID, and most important, the PMCID, which must be used to demonstrate compliance in terms of the NIH Public Access Policy. Full Article
o New Members Appointed to PMC Advisory Committee By www.ncbi.nlm.nih.gov Published On :: Thu, 17 Feb 2011 08:00:00 EST Four new members have been appointed to serve on the PMC National Advisory Committee: Philip Bourne, of the University of California, San Diego; Sophia Colamarino, an independent consultant in San Francisco; Paul Courant, of the University of Michigan; and Patricia Thibodeau, of Duke University. Each member will serve a 4-year term. The next meeting of the committee is scheduled for Friday, June 17, 2011. For more information on the committee, see PMC National Advisory Committee. Full Article
o Ten Years After: PMC Milestone Featured in NLM in Focus! By www.ncbi.nlm.nih.gov Published On :: Mon, 28 Feb 2011 08:00:00 EST PMC marked its 10th anniversary in 2010 with a celebratory event at its annual Advisory Committee meeting, held at the National Library of Medicine last June. This milestone event was recently featured in the February 17th edition of NLM In Focus, in an article NLM Milestones: The Hits Just Keep on Coming. For more information on the ten years of PMC, see the article in the May-June issue of the NLM Technical Bulletin. Full Article
o A Brand New Look for PMC! By www.ncbi.nlm.nih.gov Published On :: Thu, 26 May 2011 08:00:00 EST PMC has gotten a facelift-- or more accurately, an interface-lift! The home page, search page and other PMC informational pages have all undergone an overhaul, in order to provide users with easier navigation, enhanced features, and a look and feel that is more consistent with other recently updated NCBI sites, such as PubMed and Bookshelf. Additional new features and updates will be coming soon. For more information on navigating the new site, see the article in the July-August issue of the NLM Technical Bulletin. Full Article
o PMC Advisory Committee to Meet at NLM By www.ncbi.nlm.nih.gov Published On :: Tue, 14 Jun 2011 08:00:00 EST The PMC Advisory Committee will hold its annual meeting at the National Library of Medicine on Friday, June 17, 2011 from 9:30 am to 3 pm. Four new committee members will be joining the group, see New Members Appointed to PMC Advisory Committee. Presentations will include discussions relating to the NIH Public Access policy and a viewing of the PMC 10th Anniversary video. For more information, see PMC National Advisory Committee. Full Article
o The PMC 10th Anniversary Video is now on YouTube! By www.ncbi.nlm.nih.gov Published On :: Mon, 20 Jun 2011 08:00:00 EST A video celebrating PMC's first decade is now available for viewing on the NCBI YouTube Channel. The PMC 10th Anniversary Video can also be found on the regular YouTube site. Full Article
o JATS-Con is Coming! By www.ncbi.nlm.nih.gov Published On :: Tue, 12 Jul 2011 08:00:00 EST The second annual Journal Article Tag Suite Conference (JATS-Con) will be held on September 26 and 27, 2011, at the Natcher Conference Center on the NIH Campus in Bethesda, Maryland. The 2011 conference will feature a host of presenters who will discuss topics ranging from Best Practices to PMC Tagging Guidelines. For more information on the conference and the program, see JATS-Con. Full Article
o PMC Advisory Committee Appoints New Members By www.ncbi.nlm.nih.gov Published On :: Wed, 29 Feb 2012 08:00:00 EST The following new members have been appointed to serve on the PMC National Advisory Committee: Martha Bedard, Dean of Libraries at the University of New Mexico; and Lorraine Haricombe, Dean of Libraries at the University of Kansas and a member of SPARC's board. The next meeting of the committee is scheduled for June 19, 2012. For more information, see PMC National Advisory Committee. Full Article
o JATS-Con Dates Announced for 2012! By www.ncbi.nlm.nih.gov Published On :: Mon, 26 Mar 2012 08:00:00 EST The third annual Journal Article Tag Suite Conference (JATS-Con) will be held on October 16 and 17, 2012 on the NIH Campus in Bethesda, Maryland. JATS-Con is a conference for users of the NISO Z39.96 Journal Article Tag Suite: that is, users of any of the NLM DTDs. JATS-Con is a peer-reviewed conference with a broad range of content on the Tag Suite from the technical to publishing theory — and the latest news on the Tag Suite. For more information, see JATS-Con. Full Article
o New Version of PMC Help is Released By www.ncbi.nlm.nih.gov Published On :: Thu, 12 Jul 2012 08:00:00 EST The PMC user's guide, PMC Help has been updated to include new and improved information on navigating the site as well as descriptions and instructions on using the new search functions, such as Limits and Advanced Search Builder. Further updates will also be forthcoming. Full Article
o A Facelift for PMC By www.ncbi.nlm.nih.gov Published On :: Fri, 13 Jul 2012 08:00:00 EST PMC has recently undergone another redesign to improve the look and feel and functionality of the site, featuring more white space, cleaner lines and enhanced navigation on its article, issue, and journal archive pages. For more information, see the article in the July-August 2012 issue of the NLM Technical Bulletin. Full Article
o JATS Becomes NISO Standard By www.ncbi.nlm.nih.gov Published On :: Wed, 22 Aug 2012 08:00:00 EST The Journal Archiving Tag Suite(JATS), known formerly as the NLM DTD, has now been officially adopted as an American National Standards Institute (ANSI)/ National Information Standards Organization (NISO) standard. According to the press release from NISO, "JATS provides a common XML format in which publishers and archives can exchange journal content by preserving the intellectual content of journals independent of the form in which that content was originally delivered." For more information, see NISO Publishes Journal Article Tag Suite (JATS) Standard. Full Article
o UKPMC Rebranded as Europe PMC By www.ncbi.nlm.nih.gov Published On :: Mon, 5 Nov 2012 08:00:00 EST With the addition of several European sponsoring agencies, including the European Research Council, UKPMC was renamed Europe PMC as of November 1, 2012. Europe PMC is an outgrowth and expansion of UKPMC, which was first launched in January 2007 with sponsorship from the Wellcome Trust and several other funders of biomedical research in the UK. Europe PMC receives all of its final published articles directly from the U.S. PMC archive. It also accepts and processes author manuscripts of journal articles funded by the Europe PMC sponsoring agencies and makes them available to U.S. PMC and PMC Canada. For more information, see PMC International. Full Article
o PubReader – A New Presentation Style for PMC By www.ncbi.nlm.nih.gov Published On :: Tue, 11 Dec 2012 08:00:00 EST NCBI has developed a new web presentation style called PubReader, which offers you an easier way to use your Web browser to read the articles in PMC. Designed particularly for enhancing readability and navigation on tablet and other small screen devices, PubReader can also be used on desktops and laptops and from multiple web browsers. For more information on PubReader, see the article in the November-December issue of the NLM Technical Bulletin. Full Article
o PMC Advisory Committee Appoints New Members By www.ncbi.nlm.nih.gov Published On :: Fri, 1 Feb 2013 08:00:00 EST As of February 1, 2013, the following new members have been appointed to serve on the PMC National Advisory Committee: Ms. Sharon Terry of the Genetic Alliance; Dr. C. Victor Jongneel of the University of Illinois at Urbana-Champaign; Dr. Bevin Engelward of the Massachusetts Institute of Technology; Dr. Randall Morse of the Wadsworth Center; and Dr. Adelita Cantu of the University of Texas. For more information, see PMC National Advisory Committee. Full Article
o KoreaMed Synapse Adds PubReader as a Display Option By www.ncbi.nlm.nih.gov Published On :: Fri, 1 Feb 2013 08:00:00 EST KoreaMed Synapse, a digital archive and reference linking platform of Korean medical journals, is now using NCBI’s new PubReader presentation style to display their full-text journal articles. KoreaMed’s database of 122 journals now includes a blue ‘PubReader’ icon for each full-text article. NCBI launched PubReader in December 2012 as a convenient new way to view full-text articles in PubMed Central on desktops as well as tablets and mobile devices. In tandem with the launch, NCBI made the code used to create PubReader freely available on GitHub. Full Article
o New OA Web Service for PMC By www.ncbi.nlm.nih.gov Published On :: Fri, 19 Apr 2013 08:00:00 EST PMC is pleased to announce the new OA web service, designed to allow tool developers an easier way to find content in the PMC open access subset. Until now, it has not been easy for outside users to determine which articles in the subset are new or have been updated recently. Our new OA web service addresses this need. It provides a simple API to allow you to query the subset, to find PDF or tgz (tarred-gzipped) format files, either by article ID, or by date/time ranges. More information, along with examples, is available from the documentation page, at OA Web Service. Your feedback is welcome; please send it to the PMC Help Desk, at pubmedcentral@ncbi.nlm.nih.gov. Full Article
o Keep Better Track of PMC Features By www.ncbi.nlm.nih.gov Published On :: Mon, 22 Apr 2013 08:00:00 EST PMC has created a new email list for announcements of new or updated tools and utilities to help you keep better track of improvements to the archive. To find out more information about the list, or to subscribe, please visit PMC-Utils-Announce. Full Article
o JATS-Con 2013 Program is Now Available By www.ncbi.nlm.nih.gov Published On :: Wed, 17 Jul 2013 08:00:00 EST JATS-Con is a conference for users of the Journal Article Tag Suite, that is, users of any of the "NLM DTDs" or NISO Z39.96. JATS-Con will take place on the NIH campus in Bethesda, Maryland on October 22 and 23, 2013.The full program is now available, as are proceedings from previous years. There is no charge for the conference; however, space is limited so registration is required.You may also sign up for a pre-conference tutorial on October 21, 2013. Details are on the Tutorial Registration page. Full Article
o Search for Open Access Articles by License By www.ncbi.nlm.nih.gov Published On :: Mon, 5 Aug 2013 08:00:00 EST You can now search for Open Access articles that have certain types of licenses, by using special filters in both PMC and PubMed. These filters are based on license information that is provided to PMC by publishers and other content providers, as encoded by machine-readable identifiers in the source XML of each article. For more information, see our updated Open Access Subset page. Full Article
o New Version of PubReader is Released By www.ncbi.nlm.nih.gov Published On :: Wed, 4 Sep 2013 08:00:00 EST PMC has recently released an updated version of its PubReader view. The new version (1.2) includes a "search this page" feature that allows you to find specific terms within the article. The latest source code is also available from the GitHub repository. Full Article
o PMC Releases New ID Converter By www.ncbi.nlm.nih.gov Published On :: Mon, 18 Nov 2013 08:00:00 EST PMC has just released an upgrade to our ID converter, now dubbed the PMCID - PMID -Manuscript ID - DOI Converter. This utility allows you to start with the unique identifier for an article that is in PMC, and find additional unique identifiers that may apply to the article. Improvements include support for DOIs, auto-detection of the ID type based on its format, and enhanced output. It also provides output in any of several different formats: HTML, XML, JSON, or CSV. This tool uses an underlying web service, that is also publicly available for those needing programmatic access to this data. See the ID Converter API documentation. Full Article
o Three Million Articles are Now in PMC!! By www.ncbi.nlm.nih.gov Published On :: Mon, 24 Feb 2014 08:00:00 EST As of February 21, 2014, PMC became home to three million articles! As listed on our home page, the content has been provided in part by 1441 full participation journals, 277 NIH Portfolio journals and 2470 selective deposit journals. For related information on PMC milestones, see these announcements from 2007 and 2010, respectively. Full Article
o PMC Advisory Committee Meeting to be Held in June By www.ncbi.nlm.nih.gov Published On :: Fri, 28 Mar 2014 08:00:00 EST This year's PMC Advisory Committee meeting will be held on Tuesday, June 10. The meeting will take place in the NLM Board room starting at 9:30 am. Stay tuned for further details. Full Article
o Citation Exporter Feature Now Available By www.ncbi.nlm.nih.gov Published On :: Tue, 18 Nov 2014 08:00:00 EST PMC is happy to announce the addition of a citation exporter feature. This feature makes it easy to retrieve either styled citations that you can copy/paste into your manuscripts, or to download them into a format compatible with your bibliographic reference manager software.When viewing an Entrez search results page, each result summary will now include a "Citation" link. When, clicked, this will open a pop-up window that you can use to easily copy/paste citations formatted in one of three popular styles: AMA (American Medical Association), MLA (Modern Language Association), or APA (American Psychological Association). In addition, the box has links at the bottom that can be used to download the citation information in one of three machine-readable formats, which most bibliographic reference management software can import.The same citation box can also be invoked from an individual article, either in classic view (with the "Citation" link among the list of formats) or the PubReader view, by clicking on the citation information just below the article title in the banner.These human-readable styled citations, and machine-readable formats, will be available through a public API, and we will be providing more details about that in another announcement, on the pmc-utils-announce mailing list. Please subscribe to that list if you are interested. Full Article
o Full text now available for OA subset articles, in plain text format By www.ncbi.nlm.nih.gov Published On :: Thu, 5 Feb 2015 08:00:00 EST In order to facilitate text and data mining for articles in the Open Access Subset, we are now providing plain text files for those articles on our FTP site. These files contain the full text of the article, extracted either from the XML source files, or (for those articles that don't have XML) the PDF files. Users are directly and solely responsible for compliance with copyright restrictions and are expected to adhere to the terms and conditions defined by the copyright holder (see the PMC Copyright Notice).These text files are bundled in gzipped archives. Note that these files are quite large (each greater than one gigabyte). They are available for download as: ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/articles.txt.0-9A-B.tar.gz ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/articles.txt.C-H.tar.gz ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/articles.txt.I-N.tar.gz ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/articles.txt.O-Z.tar.gz These files are updated every week, on Saturday.For more information, see the Bulk Packages of OA Articles section of our FTP Service page. Full Article
o CC0 Filter Now Available By www.ncbi.nlm.nih.gov Published On :: Mon, 23 Nov 2015 08:00:00 EST PMC includes some journals published by US government agencies that make their articles available under a Creative Commons CC0 (public domain) license. Some other journals also apply a CC0 license to selected articles in PMC. All these articles may be used and reproduced without special permission. However, anyone using the material is requested to properly cite and acknowledge the source. You may now search for CC0 articles by using special filters in both PMC (cc0 license[filter]) and PubMed (pmc cc0 license[filter]). These filters are based on license information that is provided to PMC by publishers and encoded as machine-readable identifiers in the source XML of each article. For more information, see the Open Access Subset page. Please bear in mind that these articles, although made available under a CC0 license, may still contain photographs or illustrations copyrighted by other commercial organizations or individuals that may not be used without obtaining prior approval from the holder of the copyright. Full Article
o Updated PMC journal review process and minimum requirements By www.ncbi.nlm.nih.gov Published On :: Tue, 15 Dec 2015 08:00:00 EST The PMC Overview and FAQ have been updated to provide more information on the Scientific Quality Review Process for journals that apply to participate in PMC.In 2014, PMC implemented a scientific and editorial quality review procedure whereby expert consultants from outside the National Library of Medicine (NLM) conduct an independent review of journals seeking to participate in PMC. This was in response to a significant increase in new publishers and journals applying to participate in PMC, many of which are unknown to NLM in terms of quality and publishing practices. The independent review, which was approved by the PMC National Advisory Committee (see minutes from June 10, 2014), follows an assessment by NLM that the journal meets NLM’s criteria for its collection, as outlined in the Collection Development Manual.PMC also recently updated the minimum requirement on the number of substantive, peer-reviewed articles needed before a journal can apply to PMC. The new 25-article minimum ensures that the reviewers have a sufficient amount of content on which to base their recommendation for inclusion in PMC. The new minimum article requirement takes effect on January 1, 2016. Publishers are encouraged to use the 25-article minimum as a guideline in the interim when submitting applications. Full Article
o NIH Author Manuscripts Available for Text Mining By www.ncbi.nlm.nih.gov Published On :: Mon, 11 Jan 2016 08:00:00 EST NIH-supported scientists have made over 300,000 author manuscripts available in PMC. Now NIH is making these papers accessible to the public in a format that will allow robust text analyses.You can download the PMC collection of NIH-supported author manuscripts as a package in either XML or plain-text format at ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/manuscript/. The collection encompasses all NIH manuscripts posted to PMC that were published in July 2008 or later. While the public can access the manuscripts’ full text and accompanying figures, tables, and multimedia via the PMC website, the newly available XML and plain-text files include full text only. In addition to text mining, the files may be used consistent with the principles of fair use under copyright law.Please note that these author manuscript files are not part of the PMC Open Access Subset.The NIH Office of Extramural Research developed this resource to increase the impact of NIH funding. Through this collection, scientists will be able to analyze these manuscripts, further apply NIH research findings, and generate new discoveries.For more information, please visit the PMC author manuscript collection webpage. Full Article
o Public Access Expansion and PMC By www.ncbi.nlm.nih.gov Published On :: Thu, 24 Mar 2016 08:00:00 EST Last month marked the third anniversary of the White House’s Office of Science and Technology Policy (OSTP) memorandum directing Federal agencies with more than $100 million in annual research and development (R&D) expenditures to develop plans for increasing public access to the results of the research they support, including scholarly publications. As a result of this directive, in 2015, PMC started providing support as a public access repository for funding agencies beyond the National Institutes of Health (NIH) and Howard Hughes Medical Institute (HHMI).As of March 2015, the following additional agencies are using the NIH Manuscript Submission (NIHMS) system to facilitate the deposit in PMC of peer-reviewed manuscripts that fall under their public access policies: Agency for Healthcare Research Quality (AHRQ/HHS) Centers for Disease Control and Prevention (CDC/HHS), Food and Drug Administration (FDA/HHS), National Institute of Standards and Technology (NIST), and U.S. Department of Veterans Affairs (VA) Additionally, the following additional HHS and other federal agencies have announced public access plans and committed to using PMC as the repository for agency-funded publications: Administration for Community Living (ACL/HHS) Assistant Secretary for Preparedness and Response (ASPR/HHS) Environmental Protection Agency (EPA) National Aeronautics and Space Administration (NASA) PMC will continue to update the list of participating funding agencies at Public Access and PMC as these agencies begin implementation of their policies.More information about the current status of public access expansion as a result of the OSTP memo can be found on the White House blog. Full Article
o FTP service update to improve access to text mining collections By www.ncbi.nlm.nih.gov Published On :: Mon, 1 Aug 2016 08:00:00 EST PMC has reorganized its FTP Service site for users interested in accessing the Text Mining Collections, which include the original Open Access (OA) Subset. New top-level FTP directories help users quickly locate the content available for bulk download that best suits their research needs. These directories include: oa_package - article packages for individual OA articles oa_pdf – individual PDFs for OA articles oa_bulk – bulk packages of text from OA articles manuscript – author manuscripts collected under a funding agency’s public access policy historical_ocr – select OCR texts from the PMC Back Issue Digitization project To make it easier for users to identify and comply with the different licenses that apply to OA articles, new file lists have been created and the file lists for individual OA articles now include a “license-type” field for each article. Similarly, the bulk packages of OA article text have been divided into two sets. One set comprises articles that may be used for commercial purposes (the Commercial Use Collection); the other contains articles that can be used only for non-commercial purposes. See the Open Access Subset page for details.To allow regular users to transition to the new arrangement, the previous arrangement of files and directories will be maintained in parallel for at least four weeks (i.e., until the end of August 2016). Full Article
o PMC Bulk Download via FTP is Now Using New Naming Conventions By www.ncbi.nlm.nih.gov Published On :: Thu, 19 Jan 2017 08:00:00 EST A large-scale update of the file names used for articles available via the PMC FTP service for bulk download was undertaken in early January 2017. The new file naming convention is PMCID-based (e.g., PMC4855680.tar.gz) rather than being built from article citation data (i.e., journal abbreviation_pub date_volume_issue_page). This update was made following user reports that the previous naming convention was resulting in missing contents in cases where citation data was duplicated across multiple articles. The new convention will ensure that file names are unique and that the corpus available via the FTP service is complete. Full Article
o PMC Continues to Expand its Role as a Repository for Federally and Privately-funded Research By www.ncbi.nlm.nih.gov Published On :: Mon, 28 Aug 2017 08:00:00 EST Since March 2016, the NIH Manuscript Submission (NIHMS) system has added support for researchers from the following federal agencies to deposit in PMC any manuscripts that fall under the agency’s public access policy: Assistant Secretary for Preparedness and Response (ASPR/HHS; intramural only at this time) Environmental Protection Agency (EPA; intramural only at this time) National Aeronautics and Space Administration (NASA; intramural/civil servants and grantees) Manuscript deposit support for all Administration for Community Living (ACL/HHS) researchers will be available in NIHMS by October 2017 and for Department of Homeland Security researchers in early 2018.Additionally, the Bill & Melinda Gates Foundation Open Access Policy now requires their grantees to make their published research results available in PMC immediately upon publication under a Creative Commons Attribution (CC-BY) license. Manuscript deposit support is not provided in NIHMS for Gates-funded researchers; rather the final published version of any Gates-funded article is to be deposited directly to PMC by the publisher or a funder-supported data provider without author involvement. More information on this open access policy is available on the Gates Foundation website. PMC will continue to update the list of participating funding agencies at Public Access and PMC as support is implemented. Full Article
o Updated guidance on data deposit and linking in PMC By www.ncbi.nlm.nih.gov Published On :: Mon, 30 Oct 2017 08:00:00 EST In response to the growing interest in the availability of data associated with articles, PMC is reviewing current practices around data and seeking feedback on how to best serve the data needs of the research community.As part of these efforts, the PMC policy statement on supplementary data was recently updated to more clearly articulate the requirement that any supplementary data (images, tables, video, or other documents / files) that are associated with an article must be deposited in PMC with an article. The search filter "has suppdata[filter]" can be used in PMC to discover records with associated supplementary data files.In addition to providing supplementary data with an article, NLM is also encouraging journals and authors to make research data available in a public repository and include the relevant data citation(s) in the paper. Guidance for PMC data providers on tagging data citations is available in the Tagging Guidelines. This guidance is based on the JATS4R recommendations on data citations.Starting this month, the NIH Manuscript Submission (NIHMS) system will also accept deposits of small datasets accompanying deposits of funded author manuscripts for inclusion of PMC. (Guidance for authors is available in the NIHMS FAQ.)If you have suggestions on future directions in data for PMC to consider, please let us know at pubmedcentral@ncbi.nlm.nih.gov. Full Article
o Updated information on journal selection and participation agreements released By www.ncbi.nlm.nih.gov Published On :: Tue, 26 Jun 2018 08:00:00 EST PMC has released expanded information about its selection process for journals that apply for participation. The current review process has been in place since November 2014 and focuses on the scientific rigor and editorial quality of each journal that applies to participate in PMC. Some of the attributes taken into account as part of this process include the article content, journal policies, language quality, and presentation of content. The same assessment considerations are used for reevaluation of currently participating journals. We encourage you to visit the Journal Selection for PMC page to learn more.Publishers and journals interested in submitting an application to PMC are also encouraged to review our updated policies on agreement types. These policies provide the eligibility criteria for each type of participation agreement and should be considered alongside the pre-application requirements. We hope these updates are informative and look forward to hearing your feedback. Full Article
o Open Access Week 2018 and PMC By www.ncbi.nlm.nih.gov Published On :: Tue, 23 Oct 2018 08:00:00 EST Collaboration with publishers and funders to ensure the openness and preservation of the scientific record is one of PMC’s core principles. Open Access Week offers an opportunity to celebrate some of the recent outcomes of these collaborations: In July 2018, the PMC corpus of publicly accessible articles hit 5 million articles. In May 2018, the PMC Open Access Subset surpassed the 2 million article mark. The Author Manuscript Collection now includes more than 500,000 papers for text mining. The PMC and Research Funder Policy page underwent an update in September 2018 to increase transparency around funder support in PMC for publishers, authors, and the public. Funder policy support in PMC has been extended to the US Department of Homeland Security, in addition to several new US private research funders via the Health Research Alliance. In FY2018 more than 200 new journals committed to archiving their complete contents in PMC, to be made publicly accessible in 12 months or less. Full Article
o Discovering Associated Data in PMC By www.ncbi.nlm.nih.gov Published On :: Thu, 15 Nov 2018 08:00:00 EST In the NLM Strategic Plan released earlier this year, we noted that “[c]reating efficient ways to link the literature with associated datasets enables knowledge generation and discovery.” To that end, PMC is now aggregating data citations, data availability statements and supplementary materials, as available, in an Associated Data box. This box will only display on articles that have one or more of these features in the article.To limit your search to records with an Associated Data box, you can use the new "Associated Data" facet on the search results page:We hope that exposing this content in a consistent format and in an easy to find and easy to access manner, you will more readily find the datasets you need to further accelerate discovery and advance health. As part of our ongoing commitment to making data findable, accessible, interoperable, and re-usable (FAIR), we encourage you to contact us with your feedback on these updates and with any other suggestions you may have for improving discovery of related data in PMC. Full Article
o PMC Adds Support for Machine-Readable Clinical Trial Information By www.ncbi.nlm.nih.gov Published On :: Mon, 7 Jan 2019 08:00:00 EST Machine-readability of scholarly outputs is critical to supporting large-scale analysis of the scientific literature. To that end, PMC’s Tagging Guidelines and internal processes have been updated to support the JATS4R recommendations for tagging clinical trial information. NLM encourages PMC-participating publishers, journals, and data providers to review this guidance. Please contact us at pubmedcentral@ncbi.nlm.nih.gov if you have any questions. Full Article
o Open Access Subset FTP Clean Up By www.ncbi.nlm.nih.gov Published On :: Mon, 14 Jan 2019 08:00:00 EST On March 18, 2019, PMC will no longer provide bulk packages of Open Access (OA) Subset text and XML at the top level directory of the FTP Service. These files were superseded in August 2016 by the Commercial Use and Non-Commercial Use bulk packages located in the oa_bulk subdirectory. One set comprises articles that may be used for commercial purposes (the Commercial Use Collection); the other contains articles that can be used only for non-commercial purposes. Anyone planning to use OA subset content for non-commercial purposes will need to download both “non_comm_use.*.tar.gz” and “comm_use.*.tar.gz” to access the complete collection. See the Open Access Subset page for additional details. Questions should be directed to pubmedcentral@ncbi.nlm.nih.gov. Full Article
o Unique Identifiers for Supplemental Material By www.ncbi.nlm.nih.gov Published On :: Mon, 4 Feb 2019 08:00:00 EST PMC has updated the Associated Data box to display unique identifiers assigned to supplemental material files by the publisher when available (e.g., DOI; see PMC6351104). In cases where the publisher has not assigned a unique ID to a supplemental file, NLM will generate and display a Globally Unique Identifier (GUID; see PMC6351564). This update aims to support the reporting of datasets as well as the citation and discovery of this content.Publishers that are interested in supplying unique IDs for supplemental material files with their PMC submissions should visit the Tagging Guidelines. Full Article
o PMC Tagging Guidance for Peer Review Documents Now Available By www.ncbi.nlm.nih.gov Published On :: Wed, 31 Jul 2019 08:00:00 EST Peer review documents, including review reports and editor decision letters, are increasingly being published along with the articles they review. This practice is intended to make the publishing process more transparent. To support these efforts, PMC’s Tagging Guidelines have been updated to include the tagging of peer review documents. NLM encourages PMC-participating publishers, journals, and data providers to review this guidance. Please contact us at pubmedcentral@ncbi.nlm.nih.gov if you have any questions. Full Article
o PMC Collaborating with Publishers in Response to COVID-19 Public Health Emergency By www.ncbi.nlm.nih.gov Published On :: Thu, 26 Mar 2020 08:00:00 EST On March 13, 2020, the National Science and Technology Advisors from a dozen countries, including the United States, called on publishers to voluntarily agree to make their COVID-19 and coronavirus-related publications and associated data immediately accessible in PubMed Central (PMC) and other appropriate public repositories to support the ongoing public health emergency response efforts.For more information on which publishers have responded to this call and how to discover COVID-19 and coronavirus-related publications in PMC, see the main COVID-19 Initiative page.A FAQ is also available. If you have questions not addressed in the FAQ, please contact pmc-phe@ncbi.nlm.nih.gov.You can learn more about how this initiative fits into the wider NLM response to the current public health emergency in Dr. Patti Brennan's post, "How Does a Library Respond to a Global Crisis?" Full Article
o Library LinkOut using Outside Tool By www.nlm.nih.gov Published On :: Mon, 08 Jul 2019 09:00:00 EST Library icons now appear in PubMed Labs for libraries participating in the Library LinkOut using Outside Tool service. Full Article