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Cluster-mining: an approach for determining core structures of metallic nanoparticles from atomic pair distribution function data

A novel approach for finding and evaluating structural models of small metallic nanoparticles is presented. Rather than fitting a single model with many degrees of freedom, libraries of clusters from multiple structural motifs are built algorithmically and individually refined against experimental pair distribution functions. Each cluster fit is highly constrained. The approach, called cluster-mining, returns all candidate structure models that are consistent with the data as measured by a goodness of fit. It is highly automated, easy to use, and yields models that are more physically realistic and result in better agreement to the data than models based on cubic close-packed crystallographic cores, often reported in the literature for metallic nanoparticles.




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pinkIndexer – a universal indexer for pink-beam X-ray and electron diffraction snapshots

A crystallographic indexing algorithm, pinkIndexer, is presented for the analysis of snapshot diffraction patterns. It can be used in a variety of contexts including measurements made with a monochromatic radiation source, a polychromatic source or with radiation of very short wavelength. As such, the algorithm is particularly suited to automated data processing for two emerging measurement techniques for macromolecular structure determination: serial pink-beam X-ray crystallography and serial electron crystallography, which until now lacked reliable programs for analyzing many individual diffraction patterns from crystals of uncorrelated orientation. The algorithm requires approximate knowledge of the unit-cell parameters of the crystal, but not the wavelengths associated with each Bragg spot. The use of pinkIndexer is demonstrated by obtaining 1005 lattices from a published pink-beam serial crystallography data set that had previously yielded 140 indexed lattices. Additionally, in tests on experimental serial crystallography diffraction data recorded with quasi-monochromatic X-rays and with electrons the algorithm indexed more patterns than other programs tested.




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Structure-mining: screening structure models by automated fitting to the atomic pair distribution function over large numbers of models

A new approach is presented to obtain candidate structures from atomic pair distribution function (PDF) data in a highly automated way. It fetches, from web-based structural databases, all the structures meeting the experimenter's search criteria and performs structure refinements on them without human intervention. It supports both X-ray and neutron PDFs. Tests on various material systems show the effectiveness and robustness of the algorithm in finding the correct atomic crystal structure. It works on crystalline and nanocrystalline materials including complex oxide nanoparticles and nanowires, low-symmetry and locally distorted structures, and complicated doped and magnetic materials. This approach could greatly reduce the traditional structure searching work and enable the possibility of high-throughput real-time auto-analysis PDF experiments in the future.




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Process Explorer Mini-guide and Screenshots




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Basic tutorial of "Performance Monitor"




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Synchronising outlook between phone and laptop




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A clouded leopard cub, a Przewalski’s horse and a red panda cub were all recently born at the Smithsonian’s National Zoo

As you read here
In a 24-hour-period between July 9 and 10, 2009 a clouded leopard cub, a Przewalski's horse, and a red panda cub were all born at Smithsonian's National Zoo's Conservation and Research Center in Front Royal, Virginia.

The post A clouded leopard cub, a Przewalski’s horse and a red panda cub were all recently born at the Smithsonian’s National Zoo appeared first on Smithsonian Insider.




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Flesh Eating beetles help prepare skeletons for study at the Smithsonian’s Natural History Museum

John Ososky, preparator in the Osteology Laboratory at the Smithsonian's National Museum of Natural History in Washington, D.C., explains how skeletons of animal specimens are prepared for exhibtion and for study—with the assistance of nearly 1 million flesh-eating beetles.

The post Flesh Eating beetles help prepare skeletons for study at the Smithsonian’s Natural History Museum appeared first on Smithsonian Insider.




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Antarctic Treaty Summit, Nov. 30-Dec. 3, 2009, Smithsonian, Washington, D.C.

"The Antarctic Treaty Summit: Science-Policy Interactions in International Governance" will be convened at the Smithsonian Institution, National Museum of Natural History in Washington, DC from Nov. 30 to Dec. 3 2009. More information on this event can be found at the Web site: www.atsummit50.aq/

To assess legacy lessons about managing nearly 10% of the Earth "for peaceful purposes only"

Find out how you can be involved:

www.atsummit50.aq

The post Antarctic Treaty Summit, Nov. 30-Dec. 3, 2009, Smithsonian, Washington, D.C. appeared first on Smithsonian Insider.




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Smithsonian team examines African remains from a colonial burial site in Maryland

Forensic anthropologists from the Smithsonian's National Museum of Natural History discover African remains at a Colonial burial site in Maryland. Follow them as they study the remains, reconstruct the face and body, and share what they learn about the African experience in the Chesapeake in the 1600s.

The post Smithsonian team examines African remains from a colonial burial site in Maryland appeared first on Smithsonian Insider.




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Smithsonian geophysicist Bruce Campbell explains his work of making a detailed radar map of the Moon

Bruce Campbell, of the Center for Earth and Planetary Studies at the Smithsonian's National Air and Space Museum, is at the National Radio Astronomy Observatory in Green Bank, W. Va., to make a radar map of the Moon.

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The science of panda cubs at the Smithsonian Conservation Biology Institute

When animal care staff at the Smithsonian's National Zoo need to know when to breed their pandas or when to expect a cub they turn to the Endocrine (Hormones) Research Lab at the Zoo's Front Royal, Va. facility.

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Smithsonian volcanologist Rick Wunderman talks about volcanos and the recent eruptions in Iceland

Rick Wunderman of the Global Volcanism Program at the Smithsonian's National Museum of Natural History talks about the current volcanic activity in Iceland.

The post Smithsonian volcanologist Rick Wunderman talks about volcanos and the recent eruptions in Iceland appeared first on Smithsonian Insider.




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Meet Our Scientist: Dr. JoGayle Howard of the Smithsonian’s National Zoological Park

Dr. JoGayle Howard of the Smithsonian's National Zoo discusses her work to breed and study one of the world's most endangered cats, the clouded leopard. More about the National Zoo's work to save clouded leopards: http://nationalzoo.si.edu/SCBI/ReproductiveScience/ConsEn...
http://nationalzoo.si.edu/support/annualappeal/cloudedleo... ... (more info)

The post Meet Our Scientist: Dr. JoGayle Howard of the Smithsonian’s National Zoological Park appeared first on Smithsonian Insider.




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Meet Our Scientist: Stefan Schnitzer – Tropical Vine Science

Smithsonian Tropical Research Center Botanist Stefan Schnitzer talks about his work studying lianas (woody vines) in the jungles of Panama. These hardy vines compete with trees for water and nutrients and also act as highways for jungle animals moving through the forest canopy.

The post Meet Our Scientist: Stefan Schnitzer – Tropical Vine Science appeared first on Smithsonian Insider.




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Smithsonian entomologist Gary Hevel gives information and advice about stinkbugs in your home

Here come the stinkbugs...With the cooler temperatures of fall the brown marmorated stinkbug begins a determined quest to find a warm place to spend the winter. Crowding around window screens and searching for other ways to get inside, homeowners in the United States will share their indoor living space this winter with millions of brown marmorated stinkbugs. In this video Gary Hevel, an entomolgist at the Smithsonian's National Museum of Natural History, shares some information about these interesting creatures, as well as some advice about how to deal with those that inevitably gain entry to your home.

The post Smithsonian entomologist Gary Hevel gives information and advice about stinkbugs in your home appeared first on Smithsonian Insider.




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Scientists at a new National Zoo laboratory use DNA to diagnose illnesses and discover new species of animals

Researchers at the Smithsonian's National Zoo's new genetics lab use animal DNA to diagnose new diseases, discover new species help in conservation efforts and solve mysteries.

The post Scientists at a new National Zoo laboratory use DNA to diagnose illnesses and discover new species of animals appeared first on Smithsonian Insider.





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Meet Our Scientist: Forensic ornithologist Carla Dove explains bird-strike science

When birds and planes collide: Carla Dove, a forensic ornithologist at the Smithsonian's National Museum of Natural History, talks about the work of the Smithsonian's Feather Identification Lab and its role in improving aviation safety.

The post Meet Our Scientist: Forensic ornithologist Carla Dove explains bird-strike science appeared first on Smithsonian Insider.



  • Meet Our People
  • Video
  • bird strikes
  • Feather Identification Lab
  • National Museum of Natural History

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Device at the Smithsonian Environmental Research Center examines how phytoplankton would react if the ozone layer vanished

The post Device at the Smithsonian Environmental Research Center examines how phytoplankton would react if the ozone layer vanished appeared first on Smithsonian Insider.





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Many years of research are celebrated in the December 2010 birth of two cheetah cubs at the Smithsonian Conservation Biology Institute

The post Many years of research are celebrated in the December 2010 birth of two cheetah cubs at the Smithsonian Conservation Biology Institute appeared first on Smithsonian Insider.





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National Zoo veterinarian Katharine Hope is in charge of the health of 2,000 animals from 400 different species.

National Zoo Veterinarian Katharine Hope treats about 2,000 animals from 400 different species. She and her colleagues care for a variety of animals, from small baby flamingos to adult Asian elephants, so there's no such thing as an average day.

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Roland Kays, curator of mammals at the New York State Museum, discusses a new Smithsonian Website for sharing camera-trap images of wild animals

The post Roland Kays, curator of mammals at the New York State Museum, discusses a new Smithsonian Website for sharing camera-trap images of wild animals appeared first on Smithsonian Insider.






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Smithsonian geologist Liz Cottrell talks about what it takes to be a scientist.

Which is more important for a career as a scientist, good grades in math or a strong sense of adventure? Hear what Smithsonian geologist Liz Cottrell has to say as she recounts her own school years and the steps that led to a career she can't imagine ever giving up.

The post Smithsonian geologist Liz Cottrell talks about what it takes to be a scientist. appeared first on Smithsonian Insider.




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Smithsonian biologist Rachel Collin visits the Universidad Austral de Chile to collect special snails for her research.

In 2010 Dr. Rachel Collin visited her colleagues at the Universidad Austral de Chile in Valdivia to collect some very special snails for her research at the Smithsonian Tropical Research Institute, Panama.

The post Smithsonian biologist Rachel Collin visits the Universidad Austral de Chile to collect special snails for her research. appeared first on Smithsonian Insider.





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Hand-rearing clouded leopard cubs at the Smithsonian Conservation Biology Institute

Animal care staff at the Smithsonian Conservation Biology Institute in Front Royal, Virginia, are hand-rearing the pair of clouded leopard cubs born on March 28, increasing the chances that the cubs will be more successful at breeding later in their life.

The post Hand-rearing clouded leopard cubs at the Smithsonian Conservation Biology Institute appeared first on Smithsonian Insider.




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Tom Crouch, Senior curator in the National Air and Space Museum’s Aeronautics Division, discusses Thaddeus Lowe and the birth of American aerial reconnaissance

Tom Crouch, Senior curator in the National Air and Space Museum's Aeronautics Division, discusses Thaddeus Lowe and the birth of American aerial reconnaissance during the Civil War. This presentation was recorded on May 11, 2011 on the National Mall.

The post Tom Crouch, Senior curator in the National Air and Space Museum’s Aeronautics Division, discusses Thaddeus Lowe and the birth of American aerial reconnaissance appeared first on Smithsonian Insider.




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Kari Bruwelheide, forensic anthropologist at the Smithsonian’s National Museum of Natural History, discusses the power of bones.

Kari Bruwelheide, forensic anthropologist at the Smithsonian's National Museum of Natural History, discusses how she came to work at the museum, the power of human remains and the information that bones can contain. She and her colleagues continue to discover new ways to interpret evidence from bones and burials.

The post Kari Bruwelheide, forensic anthropologist at the Smithsonian’s National Museum of Natural History, discusses the power of bones. appeared first on Smithsonian Insider.



  • Video
  • National Museum of Natural History

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Meet Our Scientist: Matthew Carrano, curator of dinosauria at the Smithsonian’s National Museum of Natural History

Meet the Smithsonian's Matthew Carrano, curator of Dinosauria at the Smithsonian's National Museum of Natural History in Washington, D.C. Matthew studies all things dinosaur, but focuses on the evolutionary history of predatory (meat eating) dinosaurs.

The post Meet Our Scientist: Matthew Carrano, curator of dinosauria at the Smithsonian’s National Museum of Natural History appeared first on Smithsonian Insider.




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Lion cub summer school: Instead of learning their ABCs, the National Zoo’s lion cubs are learning behaviors that will help animal care staff evaluate their health.

School's nearly back in session, but the seven young lions at the Smithsonian's National Zoo have been working hard through the summer months!

The post Lion cub summer school: Instead of learning their ABCs, the National Zoo’s lion cubs are learning behaviors that will help animal care staff evaluate their health. appeared first on Smithsonian Insider.




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Meet Our Scientist: Justin Touchon, Frog Follower at the Smithsonian Tropical Research Institute in Panama

Meet Smithsonian scientist Justin Touchon, a National Science Foundation (NSF) postdoctoral researcher at the Smithsonian Tropical Research Institute in Panama.

Justin's work focuses on developmental ecology and reproductive plasticity of the hourglass treefrog (Dendropsophus ebraccatus) and red-eyed treefrog (Agalychnis callidryas). Justin and his advisor, Karen Warkentin, were the first to have witnessed the frogs laying eggs in water, in addition to doing so on land -- something with major implications for the evolutionary biology of similar creatures.

The post Meet Our Scientist: Justin Touchon, Frog Follower at the Smithsonian Tropical Research Institute in Panama appeared first on Smithsonian Insider.
















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Conrad Labandiera, Smithsonian palentologist, studies fossils to learn how insects got along before flowering plants arrived

The post Conrad Labandiera, Smithsonian palentologist, studies fossils to learn how insects got along before flowering plants arrived appeared first on Smithsonian Insider.




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Meet our Scientist Rachel Page. She studies frog-eating bats, and other animals, in Panama

Meet Rachel Page, a Smithsonian scientist in Panama who studies frog-eating bats (fringe-lipped bats), among other topics. Her current research focuses on learning and memory in neotropical bats, combining field studies with laboratory experiments to learn about predator cognition and its effects on the evolution of their prey.

The post Meet our Scientist Rachel Page. She studies frog-eating bats, and other animals, in Panama appeared first on Smithsonian Insider.