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Boom and bust cycle of marine biodiversity every 60 million years linked to uplifting of continents

A mysterious cycle of booms and busts in marine biodiversity over the past 500 million years could be tied to a periodic uplifting of the world's continents, scientists report

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First five years of Panama Canal excavations reveal fossil finds

Miniature camels and horses, a rhinoceros and a giant bear-dog are among fossils unearthed in the recent excavations of the Panama Canal expansion project. These […]

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Wetlands sinking with human-built structures

Left to themselves, coastal wetlands can adapt to sea-level rise. But humans could be sabotaging some of their best defenses, according to a review paper […]

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New Book: A History of Life in 100 Fossils

Left-handed snails, giant wombats, spiny trilobites, zombie ants, glyptodonts…these are a few of the fascinating animals and plants whose fossils spring to life across the […]

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Asteroid Mission carries Student X-ray Experiment

At 7:05 pm (EDT), Thursday, Sept. 8, NASA plans to launch a spacecraft to a near-Earth asteroid named Bennu. Among that spacecraft’s five instruments is […]

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Battle against invasive marine species comes up short as global shipping surges

In the battle against invasive species, giant commercial ships are on the front lines. But even when they follow the rules, one of their best […]

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Scientists are using the universe as a “cosmological collider”

Cambridge, MA -Physicists are capitalizing on a direct connection between the largest cosmic structures and the smallest known objects to use the universe as a […]

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A new method for in situ structural investigations of nano-sized amorphous and crystalline materials using mixed-flow reactors

Structural investigations of amorphous and nanocrystalline phases forming in solution are historically challenging. Few methods are capable of in situ atomic structural analysis and rigorous control of the system. A mixed-flow reactor (MFR) is used for total X-ray scattering experiments to examine the short- and long-range structure of phases in situ with pair distribution function (PDF) analysis. The adaptable experimental setup enables data collection for a range of different system chemistries, initial supersaturations and residence times. The age of the sample during analysis is controlled by adjusting the flow rate. Faster rates allow for younger samples to be examined, but if flow is too fast not enough data are acquired to average out excess signal noise. Slower flow rates form older samples, but at very slow speeds particles settle and block flow, clogging the system. Proper background collection and subtraction is critical for data optimization. Overall, this MFR method is an ideal scheme for analyzing the in situ structures of phases that form during crystal growth in solution. As a proof of concept, high-resolution total X-ray scattering data of amorphous and crystalline calcium phosphates and amorphous calcium carbonate were collected for PDF analysis.




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Bayesian machine learning improves single-wavelength anomalous diffraction phasing

Single-wavelength X-ray anomalous diffraction (SAD) is a frequently employed technique to solve the phase problem in X-ray crystallography. The precision and accuracy of recovered anomalous differences are crucial for determining the correct phases. Continuous rotation (CR) and inverse-beam geometry (IBG) anomalous data collection methods have been performed on tetragonal lysozyme and monoclinic survivin crystals and analysis carried out of how correlated the pairs of Friedel's reflections are after scaling. A multivariate Bayesian model for estimating anomalous differences was tested, which takes into account the correlation between pairs of intensity observations and incorporates the a priori knowledge about the positivity of intensity. The CR and IBG data collection methods resulted in positive correlation between I(+) and I(−) observations, indicating that the anomalous difference dominates between these observations, rather than different levels of radiation damage. An alternative pairing method based on near simultaneously observed Bijvoet's pairs displayed lower correlation and it was unsuccessful for recovering useful anomalous differences when using the multivariate Bayesian model. In contrast, multivariate Bayesian treatment of Friedel's pairs improved the initial phasing of the two tested crystal systems and the two data collection methods.




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Converting three-space matrices to equivalent six-space matrices for Delone scalars in S6

The transformations from the primitive cells of the centered Bravais lattices to the corresponding centered cells have conventionally been listed as three-by-three matrices that transform three-space lattice vectors. Using those three-by-three matrices when working in the six-dimensional space of lattices represented as Selling scalars as used in Delone (Delaunay) reduction, one could transform to the three-space representation, apply the three-by-three matrices and then back-transform to the six-space representation, but it is much simpler to have the equivalent six-by-six matrices and apply them directly. The general form of the transformation from the three-space matrix to the corresponding matrix operating on Selling scalars (expressed in space S6) is derived, and the particular S6matrices for the centered Delone types are listed. (Note: in his later publications, Boris Delaunay used the Russian version of his surname, Delone.)




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The atomic structure of the Bergman-type icosahedral quasicrystal based on the Ammann–Kramer–Neri tiling

In this study, the atomic structure of the ternary icosahedral ZnMgTm quasicrystal (QC) is investigated by means of single-crystal X-ray diffraction. The structure is found to be a member of the Bergman QC family, frequently found in Zn–Mg–rare-earth systems. The ab initio structure solution was obtained by the use of the Superflip software. The infinite structure model was founded on the atomic decoration of two golden rhombohedra, with an edge length of 21.7 Å, constituting the Ammann–Kramer–Neri tiling. The refined structure converged well with the experimental diffraction diagram, with the crystallographic R factor equal to 9.8%. The Bergman clusters were found to be bonded by four possible linkages. Only two linkages, b and c, are detected in approximant crystals and are employed to model the icosahedral QCs in the cluster approach known for the CdYb Tsai-type QC. Additional short b and a linkages are found in this study. Short interatomic distances are not generated by those linkages due to the systematic absence of atoms and the formation of split atomic positions. The presence of four linkages allows the structure to be pictured as a complete covering by rhombic triacontahedral clusters and consequently there is no need to define the interstitial part of the structure (i.e. that outside the cluster). The 6D embedding of the solved structure is discussed for the final verification of the model.




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Multiple Bragg reflection by a thick mosaic crystal. II. Simplified transport equation solved on a grid

The generalized Darwin–Hamilton equations [Wuttke (2014). Acta Cryst. A70, 429–440] describe multiple Bragg reflection from a thick, ideally imperfect crystal. These equations are simplified by making full use of energy conservation, and it is demonstrated that the conventional two-ray Darwin–Hamilton equations are obtained as a first-order approximation. Then an efficient numeric solution method is presented, based on a transfer matrix for discretized directional distribution functions and on spectral collocation in the depth coordinate. Example solutions illustrate the orientational spread of multiply reflected rays and the distortion of rocking curves, especially if the detector only covers a finite solid angle.




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Astronomers solve mystery of dusty foot trails crossing telescope mirrors

A mysterious nocturnal animal was leaving its tracks on the delicate mirrors of the telescopes at the Smithsonian's Whipple Observatory in Arizona. With a little ingenuity and a live trap, the mystery was solved. The visitor proved to be a ringtail cat, a member of the raccoon family.

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Smithsonian team examines African remains from a colonial burial site in Maryland

Forensic anthropologists from the Smithsonian's National Museum of Natural History discover African remains at a Colonial burial site in Maryland. Follow them as they study the remains, reconstruct the face and body, and share what they learn about the African experience in the Chesapeake in the 1600s.

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Preventing ballast-water invasions of alien species

George Smith, a marine biologist at the Smithsonian Environmental Research Center, explains his work of finding ways to prevent invasive species from being released in Baltimore Harbor in the ballast water of large ships.

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Smithsonian geophysicist Bruce Campbell explains his work of making a detailed radar map of the Moon

Bruce Campbell, of the Center for Earth and Planetary Studies at the Smithsonian's National Air and Space Museum, is at the National Radio Astronomy Observatory in Green Bank, W. Va., to make a radar map of the Moon.

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Meet Our Scientist: Jefferson Hall – Invasive Plant Science

Invasive plant species are threatening native species across the globe. Learn how scientists at the Smithsonian Tropical Research Center in Panama are trying to fight one species of grass in Panama that is wreaking havoc on the country's tropical biodiversity.

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Meet Our Scientist–Helen James dives into dormant Hawaiian volcanoes to find bird fossils

Smithsonian Scientist Helen James dives into dormant Hawaiian volcanoes to find bird fossils. Her work to identify these species (some new species, some extinct) helps us learn about the past--specifically, how humans might have caused the extinction of certain bird species.

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Meet Our Scientist: Forensic ornithologist Carla Dove explains bird-strike science

When birds and planes collide: Carla Dove, a forensic ornithologist at the Smithsonian's National Museum of Natural History, talks about the work of the Smithsonian's Feather Identification Lab and its role in improving aviation safety.

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  • Meet Our People
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Roland Kays, curator of mammals at the New York State Museum, discusses a new Smithsonian Website for sharing camera-trap images of wild animals

The post Roland Kays, curator of mammals at the New York State Museum, discusses a new Smithsonian Website for sharing camera-trap images of wild animals appeared first on Smithsonian Insider.





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Long-term killer bee study in tropics yields unexpected discovery: invasive killer bees are good for the native bees

As enjoyable as scientific work can be, says entomologist Dave Roubik, its greatest satisfactions are often long delayed. He gives the best example from his career: a seventeen-year study that finally helped to change our understanding of the notorious "killer bees."

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Smithsonian biologist Rachel Collin visits the Universidad Austral de Chile to collect special snails for her research.

In 2010 Dr. Rachel Collin visited her colleagues at the Universidad Austral de Chile in Valdivia to collect some very special snails for her research at the Smithsonian Tropical Research Institute, Panama.

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Meet our Scientist–Mark Torchin tracks invasive marine species and their parasites in Panama

Mark Torchin, a marine ecologist at the Smithsonian Tropical Research Institute (STRI) in Panama, talks about how he studies the parasites of invasive marine animals such as snails. Much of his research focuses on biological invasions and the dynamics between the host, the parasites and the surrounding ecosystem.

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Tom Crouch, Senior curator in the National Air and Space Museum’s Aeronautics Division, discusses Thaddeus Lowe and the birth of American aerial reconnaissance

Tom Crouch, Senior curator in the National Air and Space Museum's Aeronautics Division, discusses Thaddeus Lowe and the birth of American aerial reconnaissance during the Civil War. This presentation was recorded on May 11, 2011 on the National Mall.

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Kari Bruwelheide, forensic anthropologist at the Smithsonian’s National Museum of Natural History, discusses the power of bones.

Kari Bruwelheide, forensic anthropologist at the Smithsonian's National Museum of Natural History, discusses how she came to work at the museum, the power of human remains and the information that bones can contain. She and her colleagues continue to discover new ways to interpret evidence from bones and burials.

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Conrad Labandiera, Smithsonian palentologist, studies fossils to learn how insects got along before flowering plants arrived

The post Conrad Labandiera, Smithsonian palentologist, studies fossils to learn how insects got along before flowering plants arrived appeared first on Smithsonian Insider.




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Geisha Hairstyling, ca. 1927, a silent black & white archival film clip from the Smithsonian’s Human Studies Film Archives

Silent black & white archival film clip from "Japan: Promotional and Theatrical Footage, ca. 1927". The full film, which is 17 minutes long, includes segments from what are believed to be a theatrical film, a promotional film and, possibly, amateur film - all of unknown origin.

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Kepler 11: A Six-Planet Sonata by Alex Parker, postdoctoral researcher at the Harvard–Smithsonian Center for Astrophysics

The post Kepler 11: A Six-Planet Sonata by Alex Parker, postdoctoral researcher at the Harvard–Smithsonian Center for Astrophysics appeared first on Smithsonian Insider.




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Learn to use the Smithsonian Wild website of amazing animal photos!

Learn how to use the Smithsonian Wild website to find amazing camera trap photos of mammals from around the world

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Asian elephant journey: Calgary to National Zoo

On Monday, June 23, Asian elephants Swarna, Maharani and Kumala finished their 30-day quarantine and made their public debut at the Smithsonian’s National Zoo. This […]

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